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Aliases for LOC105375427 Gene

Subcategory (RNA class) for LOC105375427 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375427 Gene

  • Uncharacterized LOC105375427 3

External Ids for LOC105375427 Gene

Previous GeneCards Identifiers for LOC105375427 Gene

  • GC07U904118

Summaries for LOC105375427 Gene

GeneCards Summary for LOC105375427 Gene

LOC105375427 (Uncharacterized LOC105375427) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375427 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375427 Gene

Genomics for LOC105375427 Gene

GeneHancer (GH) Regulatory Elements for LOC105375427 Gene

Promoters and enhancers for LOC105375427 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J100215 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 0.4 -14.1 -14060 9.2 HDGF PKNOX1 SMAD1 SIN3A IRF4 YY1 GLIS2 ZNF207 ZNF143 ATF7 PVRIG PIR47005 PILRB STAG3L5P MBLAC1 AP4M1 GPC2 CNPY4 PILRA ZCWPW1
GH07J100236 Enhancer 0.7 ENCODE 0.7 +4.2 4157 2.4 KLF1 KLF17 ZNF384 ZIC2 HIC1 ZNF121 ZNF335 ZFHX2 GLIS2 PATZ1 GPC2 PVRIG CASTOR3 STAG3 PILRA MOSPD3 LOC105375427 LOC105375426 GC07M100182
GH07J100244 Enhancer 1.2 Ensembl ENCODE 0.4 +13.3 13285 4.3 HDGF PKNOX1 CLOCK FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZSCAN25 AP4M1 STAG3L5P ZNF3 TRIM4 SRRT PTCD1 LOC100131859 GIGYF1 ZSCAN21
GH07J100243 Enhancer 1.1 Ensembl ENCODE 0.4 +10.0 10014 1.3 HDAC1 YBX3 PKNOX1 ATF1 ARNT ZNF121 FOS ATF7 CREM SMARCA5 PVRIG MBLAC1 CASTOR3 STAG3 GPC2 LOC105375427 LOC105375426 GC07M100182
GH07J100226 Enhancer 0.8 ENCODE 0.4 -6.9 -6912 1.4 HDAC1 PKNOX1 ATF1 ATF7 SMARCA5 ZNF592 NFIC SMARCA4 GMEB1 GLIS1 PVRIG AP4M1 ZCWPW1 LOC105375427 PIR47005 CASTOR3 GC07M100182
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375427 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375427 Gene

Genomic Locations for LOC105375427 Gene
chr7:100,233,681-100,234,760
(GRCh38/hg38)
Size:
1,080 bases
Orientation:
Plus strand

Genomic View for LOC105375427 Gene

Genes around LOC105375427 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375427 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375427 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375427 Gene

Proteins for LOC105375427 Gene

Post-translational modifications for LOC105375427 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375427 Gene

Domains & Families for LOC105375427 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375427 Gene

Function for LOC105375427 Gene

Phenotypes From GWAS Catalog for LOC105375427 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375427 Gene

Localization for LOC105375427 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375427 Gene

Pathways & Interactions for LOC105375427 Gene

SuperPathways for LOC105375427 Gene

No Data Available

Interacting Proteins for LOC105375427 Gene

Gene Ontology (GO) - Biological Process for LOC105375427 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375427 Gene

Drugs & Compounds for LOC105375427 Gene

No Compound Related Data Available

Transcripts for LOC105375427 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375427 Gene

No ASD Table

Relevant External Links for LOC105375427 Gene

GeneLoc Exon Structure for
LOC105375427

No data available for mRNA/cDNA for LOC105375427 Gene

Expression for LOC105375427 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375427 Gene

Orthologs for LOC105375427 Gene

No data available for Orthologs and Evolution for LOC105375427 Gene

Paralogs for LOC105375427 Gene

No data available for Paralogs for LOC105375427 Gene

Variants for LOC105375427 Gene

Sequence variations from dbSNP and Humsavar for LOC105375427 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1001602180 -- 100,235,026(+) T/C downstream_transcript_variant
rs1003233639 -- 100,232,998(+) G/C upstream_transcript_variant
rs1003306633 -- 100,234,245(+) G/A non_coding_transcript_variant
rs1003618418 -- 100,232,601(+) C/T upstream_transcript_variant
rs1004142949 -- 100,234,276(+) C/G non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375427 Gene

Disorders for LOC105375427 Gene

No disorders were found for LOC105375427 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375427 Gene

Publications for LOC105375427 Gene

No publications were found for LOC105375427 Gene.

Products for LOC105375427 Gene

Sources for LOC105375427 Gene

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