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Aliases for LOC105375423 Gene

Subcategory (RNA class) for LOC105375423 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375423 Gene

  • Uncharacterized LOC105375423 3

External Ids for LOC105375423 Gene

Previous GeneCards Identifiers for LOC105375423 Gene

  • GC07U904248

Summaries for LOC105375423 Gene

GeneCards Summary for LOC105375423 Gene

LOC105375423 (Uncharacterized LOC105375423) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375423 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375423 Gene

Genomics for LOC105375423 Gene

GeneHancer (GH) Regulatory Elements for LOC105375423 Gene

Promoters and enhancers for LOC105375423 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J099996 Promoter/Enhancer 2.1 VISTA EPDnew Ensembl ENCODE dbSUPER 650.7 -1.7 -1744 2.2 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 YBX1 ZNF48 YY1 LOC105375423 ZKSCAN1 TRIM4 ZSCAN25 ZNF394 ZNF3 ZNF655 PCOLCE LOC100419643 SMURF1
GH07J100000 Enhancer 0.8 ENCODE dbSUPER 650.7 +1.4 1384 1.5 GATAD2A MCM3 FOXA2 NFIA RXRA SP5 CEBPG ZNF384 SP1 CEBPA LOC105375423 TRIM4 AP4M1 ZSCAN25 ZNF3 PTCD1 SMURF1 ZNF394 PCOLCE ZNF655
GH07J100002 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.7 +4.6 4646 2.7 FOXA2 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 SLC30A9 ATF7 RXRA TRIM4 PILRA MBLAC1 LOC105375423 ZKSCAN1
GH07J100011 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +13.3 13301 1.7 HDAC1 PKNOX1 FOXA2 ARID4B RARA YY1 CREM THAP11 RXRA USF2 ZNF789 TRIM4 ZKSCAN1 LOC105375423
GH07J099994 Enhancer 1 Ensembl dbSUPER 0.4 -5.1 -5067 0.4 ZNF2 RAD21 ZNF335 ZNF213 ARID2 ZNF143 DEK ZNF654 ZBTB25 CEBPB LOC100128334 ZSCAN21 LOC100131859 COPS6 TAF6 TRIM4 GJC3 ENSG00000237640 CNPY4 MBLAC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375423 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375423 Gene

Genomic Locations for LOC105375423 Gene
chr7:99,999,451-100,011,750
(GRCh38/hg38)
Size:
12,300 bases
Orientation:
Plus strand

Genomic View for LOC105375423 Gene

Genes around LOC105375423 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375423 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375423 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375423 Gene

Proteins for LOC105375423 Gene

Post-translational modifications for LOC105375423 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375423 Gene

Domains & Families for LOC105375423 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375423 Gene

Function for LOC105375423 Gene

Phenotypes From GWAS Catalog for LOC105375423 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375423 Gene

Localization for LOC105375423 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375423 Gene

Pathways & Interactions for LOC105375423 Gene

SuperPathways for LOC105375423 Gene

No Data Available

Interacting Proteins for LOC105375423 Gene

Gene Ontology (GO) - Biological Process for LOC105375423 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375423 Gene

Drugs & Compounds for LOC105375423 Gene

No Compound Related Data Available

Transcripts for LOC105375423 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375423 Gene

No ASD Table

Relevant External Links for LOC105375423 Gene

GeneLoc Exon Structure for
LOC105375423

No data available for mRNA/cDNA for LOC105375423 Gene

Expression for LOC105375423 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375423 Gene

Orthologs for LOC105375423 Gene

No data available for Orthologs and Evolution for LOC105375423 Gene

Paralogs for LOC105375423 Gene

No data available for Paralogs for LOC105375423 Gene

Variants for LOC105375423 Gene

Sequence variations from dbSNP and Humsavar for LOC105375423 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000060722 -- 99,998,915(+) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000434226 -- 100,004,455(+) A/G intron_variant
rs1000524221 -- 100,002,901(+) C/T intron_variant
rs1000558486 -- 100,003,095(+) G/A intron_variant
rs1000587452 -- 100,009,337(+) G/A downstream_transcript_variant, genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375423 Gene

Disorders for LOC105375423 Gene

No disorders were found for LOC105375423 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375423 Gene

Publications for LOC105375423 Gene

No publications were found for LOC105375423 Gene.

Products for LOC105375423 Gene

Sources for LOC105375423 Gene

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