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Aliases for LOC105375421 Gene

Subcategory (RNA class) for LOC105375421 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375421 Gene

  • Uncharacterized LOC105375421 3
  • AC004834.1 5

External Ids for LOC105375421 Gene

Previous GeneCards Identifiers for LOC105375421 Gene

  • GC07U904197

Summaries for LOC105375421 Gene

GeneCards Summary for LOC105375421 Gene

LOC105375421 (Uncharacterized LOC105375421) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375421 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375421 Gene

Genomics for LOC105375421 Gene

GeneHancer (GH) Regulatory Elements for LOC105375421 Gene

Promoters and enhancers for LOC105375421 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I099324 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.8 -2.8 -2812 7.3 ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 NFYC MEF2D ARPC1A TRRAP ZSCAN25 ENSG00000242798 ZNF655 ZNF3 ARPC1B CPSF4 PTCD1 TRIM4
GH07I099312 Enhancer 0.9 Ensembl ENCODE 0.4 +12.7 12725 0.6 CTCF FOXA2 RB1 TEAD4 ARID4B MAX EBF1 ZNF48 RAD21 CC2D1A SMURF1 LOC105375421 GC07P099242
GH07I099314 Enhancer 0.6 ENCODE 0.4 +11.1 11147 0.5 CTCF KLF1 ZNF687 JUNB EBF1 BATF IRF4 ZFHX2 EGR2 SMURF1 ARPC1B LOC105375421 GC07P099242
GH07I099308 Enhancer 0.6 ENCODE 0.4 +16.9 16888 1.5 TEAD4 TAL1 CBFA2T3 ZNF121 TCF12 NFIC HDAC2 CBFA2T2 KDM1A LOC101927550 SMURF1 LOC105375421 GC07P099242 MYH16
GH07I099272 Enhancer 1.1 Ensembl ENCODE 0.2 +52.0 51950 2.3 CLOCK ZNF121 ARID2 ZNF207 FOS ATF7 ZNF263 REST KAT8 SNIP1 ZSCAN25 ZNF655 TRIM4 PTCD1 LOC101927550 ZNF3 TRRAP LOC100419643 ZNF394 AP4M1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375421 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375421 Gene

Genomic Locations for LOC105375421 Gene
chr7:99,252,452-99,325,826
(GRCh38/hg38)
Size:
73,375 bases
Orientation:
Minus strand

Genomic View for LOC105375421 Gene

Genes around LOC105375421 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375421 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375421 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375421 Gene

Proteins for LOC105375421 Gene

Post-translational modifications for LOC105375421 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375421 Gene

Domains & Families for LOC105375421 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375421 Gene

Function for LOC105375421 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375421 Gene

Localization for LOC105375421 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375421 Gene

Pathways & Interactions for LOC105375421 Gene

SuperPathways for LOC105375421 Gene

No Data Available

Interacting Proteins for LOC105375421 Gene

Gene Ontology (GO) - Biological Process for LOC105375421 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375421 Gene

Drugs & Compounds for LOC105375421 Gene

No Compound Related Data Available

Transcripts for LOC105375421 Gene

mRNA/cDNA for LOC105375421 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375421 Gene

No ASD Table

Relevant External Links for LOC105375421 Gene

GeneLoc Exon Structure for
LOC105375421

Expression for LOC105375421 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375421 Gene

Orthologs for LOC105375421 Gene

Evolution for LOC105375421 Gene

ENSEMBL:
Gene Tree for LOC105375421 (if available)
TreeFam:
Gene Tree for LOC105375421 (if available)

No data available for Orthologs for LOC105375421 Gene

Paralogs for LOC105375421 Gene

No data available for Paralogs for LOC105375421 Gene

Variants for LOC105375421 Gene

Sequence variations from dbSNP and Humsavar for LOC105375421 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000013567 -- 99,325,481(-) C/T intron_variant
rs1000043131 -- 99,325,722(-) G/A non_coding_transcript_variant
rs1000064394 -- 99,280,210(-) T/A genic_downstream_transcript_variant, intron_variant
rs1000264964 -- 99,303,553(-) C/T intron_variant
rs1000269248 -- 99,315,740(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375421 Gene

Disorders for LOC105375421 Gene

No disorders were found for LOC105375421 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375421 Gene

Publications for LOC105375421 Gene

No publications were found for LOC105375421 Gene.

Products for LOC105375421 Gene

Sources for LOC105375421 Gene

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