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Aliases for LOC105375409 Gene

Subcategory (RNA class) for LOC105375409 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375409 Gene

  • Uncharacterized LOC105375409 3

External Ids for LOC105375409 Gene

Previous GeneCards Identifiers for LOC105375409 Gene

  • GC07U904261

Summaries for LOC105375409 Gene

GeneCards Summary for LOC105375409 Gene

LOC105375409 (Uncharacterized LOC105375409) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375409 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375409 Gene

Genomics for LOC105375409 Gene

GeneHancer (GH) Regulatory Elements for LOC105375409 Gene

Promoters and enhancers for LOC105375409 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J095658 Enhancer 0.4 ENCODE 650.7 -0.6 -596 2.7 MITF HLF GABPA LOC105375409 ASB4 PPP1R9A GC07P095617
GH07J095627 Enhancer 1.2 VISTA ENCODE 0.3 -30.4 -30418 4.7 INSM2 FEZF1 GLIS2 RCOR1 RXRA CEBPB REST ZNF488 TSHZ1 ZNF843 PDK4 ENSG00000231170 GC07P095617 LOC105375409
GH07J095690 Enhancer 0.7 FANTOM5 0.3 +30.4 30425 0.1 CTCF ZNF654 ZNF362 TRIM22 REST ZNF384 KDM5A RAD21 CC2D1A SKIL PON1 GC07P095693 LOC105375409
GH07J095692 Enhancer 0.6 ENCODE 0.3 +30.2 30192 0.1 CTCF ZNF654 ZNF362 TRIM22 REST KDM5A RAD21 ZNF335 CC2D1A SKIL GC07P095693 LOC105375409
GH07J095636 Enhancer 0.5 ENCODE 0.3 -24.0 -23958 0.2 JUND NR2F1 HMBOX1 RUNX3 LOC105375409 GC07P095617
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375409 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375409 Gene

Genomic Locations for LOC105375409 Gene
chr7:95,660,322-95,719,917
(GRCh38/hg38)
Size:
59,596 bases
Orientation:
Plus strand

Genomic View for LOC105375409 Gene

Genes around LOC105375409 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375409 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375409 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375409 Gene

Proteins for LOC105375409 Gene

Post-translational modifications for LOC105375409 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375409 Gene

Domains & Families for LOC105375409 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375409 Gene

Function for LOC105375409 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375409 Gene

Localization for LOC105375409 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375409 Gene

Pathways & Interactions for LOC105375409 Gene

SuperPathways for LOC105375409 Gene

No Data Available

Interacting Proteins for LOC105375409 Gene

Gene Ontology (GO) - Biological Process for LOC105375409 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375409 Gene

Drugs & Compounds for LOC105375409 Gene

No Compound Related Data Available

Transcripts for LOC105375409 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375409 Gene

No ASD Table

Relevant External Links for LOC105375409 Gene

GeneLoc Exon Structure for
LOC105375409

No data available for mRNA/cDNA for LOC105375409 Gene

Expression for LOC105375409 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375409 Gene

Orthologs for LOC105375409 Gene

No data available for Orthologs and Evolution for LOC105375409 Gene

Paralogs for LOC105375409 Gene

No data available for Paralogs for LOC105375409 Gene

Variants for LOC105375409 Gene

Sequence variations from dbSNP and Humsavar for LOC105375409 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000069352 -- 95,663,491(+) A/G intron_variant
rs1000088294 -- 95,678,868(+) T/C genic_downstream_transcript_variant, intron_variant
rs1000231306 -- 95,711,068(+) A/G genic_downstream_transcript_variant, intron_variant
rs1000238413 -- 95,707,587(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000319783 -- 95,669,791(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375409 Gene

Disorders for LOC105375409 Gene

No disorders were found for LOC105375409 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375409 Gene

Publications for LOC105375409 Gene

No publications were found for LOC105375409 Gene.

Products for LOC105375409 Gene

Sources for LOC105375409 Gene

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