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Aliases for LOC105375378 Gene

Subcategory (RNA class) for LOC105375378 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375378 Gene

  • Uncharacterized LOC105375378 3

External Ids for LOC105375378 Gene

Previous GeneCards Identifiers for LOC105375378 Gene

  • GC07U904277

Summaries for LOC105375378 Gene

GeneCards Summary for LOC105375378 Gene

LOC105375378 (Uncharacterized LOC105375378) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375378 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375378 Gene

Genomics for LOC105375378 Gene

GeneHancer (GH) Regulatory Elements for LOC105375378 Gene

Promoters and enhancers for LOC105375378 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J083467 Enhancer 1.1 Ensembl ENCODE 0.4 +13.4 13424 1.9 PKNOX1 SIN3A IRF4 FOS RUNX3 JUNB REST ZNF518A MAFF SP7 LOC105375378 ENSG00000230617 SEMA3E
GH07J083465 Enhancer 0.6 ENCODE dbSUPER 0.4 +15.7 15673 2.4 POLR2A MAFK ZBTB40 LOC105375378 ENSG00000230617 SEMA3E
GH07J083457 Enhancer 0.7 ENCODE dbSUPER 0.3 +24.8 24782 0.8 NANOG POLR2A EBF1 MEF2B PRDM1 LOC105375378 ENSG00000230617 SEMA3E
GH07J083648 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.1 -166.4 -166422 1.3 CTCF USF1 L3MBTL2 ZNF189 MZF1 SIN3A ZNF384 MNT ZIC2 ZNF335 SEMA3E LOC105375378
GH07J083460 Enhancer 0.6 FANTOM5 ENCODE 0.3 +21.4 21445 1.5 PRDM1 LOC105375378 ENSG00000230617 SEMA3E
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375378 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375378 Gene

Genomic Locations for LOC105375378 Gene
chr7:83,471,781-83,482,249
(GRCh38/hg38)
Size:
10,469 bases
Orientation:
Minus strand

Genomic View for LOC105375378 Gene

Genes around LOC105375378 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375378 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375378 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375378 Gene

Proteins for LOC105375378 Gene

Post-translational modifications for LOC105375378 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375378 Gene

Domains & Families for LOC105375378 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375378 Gene

Function for LOC105375378 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375378 Gene

Localization for LOC105375378 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375378 Gene

Pathways & Interactions for LOC105375378 Gene

SuperPathways for LOC105375378 Gene

No Data Available

Interacting Proteins for LOC105375378 Gene

Gene Ontology (GO) - Biological Process for LOC105375378 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375378 Gene

Drugs & Compounds for LOC105375378 Gene

No Compound Related Data Available

Transcripts for LOC105375378 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375378 Gene

No ASD Table

Relevant External Links for LOC105375378 Gene

GeneLoc Exon Structure for
LOC105375378

No data available for mRNA/cDNA for LOC105375378 Gene

Expression for LOC105375378 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375378 Gene

Orthologs for LOC105375378 Gene

No data available for Orthologs and Evolution for LOC105375378 Gene

Paralogs for LOC105375378 Gene

No data available for Paralogs for LOC105375378 Gene

Variants for LOC105375378 Gene

Sequence variations from dbSNP and Humsavar for LOC105375378 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000122790 -- 83,477,602(-) A/G intron_variant
rs1000168717 -- 83,479,925(-) A/G intron_variant
rs1000200286 -- 83,480,239(-) G/A intron_variant
rs1000349424 -- 83,483,004(-) A/G upstream_transcript_variant
rs1000407433 -- 83,477,418(-) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375378 Gene

Disorders for LOC105375378 Gene

No disorders were found for LOC105375378 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375378 Gene

Publications for LOC105375378 Gene

No publications were found for LOC105375378 Gene.

Products for LOC105375378 Gene

Sources for LOC105375378 Gene

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