Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105375376 Gene

Subcategory (RNA class) for LOC105375376 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375376 Gene

  • Uncharacterized LOC105375376 3

External Ids for LOC105375376 Gene

Previous GeneCards Identifiers for LOC105375376 Gene

  • GC07U904162

Summaries for LOC105375376 Gene

GeneCards Summary for LOC105375376 Gene

LOC105375376 (Uncharacterized LOC105375376) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375376 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375376 Gene

Genomics for LOC105375376 Gene

GeneHancer (GH) Regulatory Elements for LOC105375376 Gene

Promoters and enhancers for LOC105375376 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J082699 Enhancer 1 Ensembl ENCODE 0.7 -4.4 -4362 1.2 PKNOX1 NFIB NEUROD1 BMI1 ZBTB7B ZNF207 RCOR1 FOS GATAD2B ZNF217 LOC105375376 GC07P083018
GH07J082714 Enhancer 0.6 ENCODE 0.4 -19.3 -19319 1.1 SMARCA5 SRF ZNF687 EBF1 ZNF592 RELA IKZF1 EED NFE2 PRDM1 LOC105375376 GC07P083018
GH07J082677 Enhancer 0.6 ENCODE 0.4 +17.8 17831 1.9 CTCF PKNOX1 MAX ZNF2 ATF2 GATA3 ATF7 RCOR1 CREM RUNX3 LOC105375376 ENSG00000228711
GH07J082727 Enhancer 0.6 ENCODE 0.3 -31.2 -31214 0.1 CTCF ZNF654 NFIB TRIM22 RAD21 RFX5 NFIC POLR3A SMC3 ZNF143 LOC105375376 GC07P083018
GH07J082759 Enhancer 0.5 ENCODE 0.2 -64.4 -64419 0.9 SP1 NANOG POLR2A POU5F1 LOC105375376 GC07P083018 PCLO
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375376 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375376 Gene

Genomic Locations for LOC105375376 Gene
chr7:82,690,719-82,695,876
(GRCh38/hg38)
Size:
5,158 bases
Orientation:
Minus strand

Genomic View for LOC105375376 Gene

Genes around LOC105375376 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375376 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375376 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375376 Gene

Proteins for LOC105375376 Gene

Post-translational modifications for LOC105375376 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375376 Gene

Domains & Families for LOC105375376 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375376 Gene

Function for LOC105375376 Gene

Phenotypes From GWAS Catalog for LOC105375376 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375376 Gene

Localization for LOC105375376 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375376 Gene

Pathways & Interactions for LOC105375376 Gene

SuperPathways for LOC105375376 Gene

No Data Available

Interacting Proteins for LOC105375376 Gene

Gene Ontology (GO) - Biological Process for LOC105375376 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375376 Gene

Drugs & Compounds for LOC105375376 Gene

No Compound Related Data Available

Transcripts for LOC105375376 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375376 Gene

No ASD Table

Relevant External Links for LOC105375376 Gene

GeneLoc Exon Structure for
LOC105375376

No data available for mRNA/cDNA for LOC105375376 Gene

Expression for LOC105375376 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375376 Gene

Orthologs for LOC105375376 Gene

No data available for Orthologs and Evolution for LOC105375376 Gene

Paralogs for LOC105375376 Gene

No data available for Paralogs for LOC105375376 Gene

Variants for LOC105375376 Gene

Sequence variations from dbSNP and Humsavar for LOC105375376 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000582470 -- 82,696,467(-) C/T upstream_transcript_variant
rs1001383305 -- 82,696,543(-) G/A upstream_transcript_variant
rs1001391450 -- 82,697,020(-) C/A upstream_transcript_variant
rs1001485431 -- 82,690,354(-) A/C downstream_transcript_variant
rs1002434056 -- 82,695,573(-) T/C genic_upstream_transcript_variant, non_coding_transcript_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375376 Gene

Disorders for LOC105375376 Gene

No disorders were found for LOC105375376 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375376 Gene

Publications for LOC105375376 Gene

No publications were found for LOC105375376 Gene.

Products for LOC105375376 Gene

Sources for LOC105375376 Gene

Content
Loading form....