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Aliases for LOC105375368 Gene

Subcategory (RNA class) for LOC105375368 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375368 Gene

  • Uncharacterized LOC105375368 3
  • AC004990.1 5

External Ids for LOC105375368 Gene

Previous GeneCards Identifiers for LOC105375368 Gene

  • GC07U903898

Summaries for LOC105375368 Gene

GeneCards Summary for LOC105375368 Gene

LOC105375368 (Uncharacterized LOC105375368) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375368 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375368 Gene

Genomics for LOC105375368 Gene

GeneHancer (GH) Regulatory Elements for LOC105375368 Gene

Promoters and enhancers for LOC105375368 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J077989 Enhancer 1.1 Ensembl ENCODE 650.7 -0.2 -170 1 ATF1 FOXA2 NCOA2 ZNF766 GATA2 FOS ATF7 NCOA1 ZNF592 MEF2D LOC105375368 APTR GC07P077956
GH07J078018 Enhancer 1.1 Ensembl ENCODE 11.4 +29.5 29464 2.9 PKNOX1 ARNT ZFP64 YY1 GLIS2 ZNF213 ELK1 ZNF143 KLF7 SP3 RSBN1L SPDYE17 SPDYE18 CCDC146 LOC105375368 APTR GC07M077998 ENSG00000281008
GH07J077811 Enhancer 0.8 Ensembl ENCODE 9.8 -178.3 -178294 1.9 SMARCE1 JUND GATA3 TEAD1 JUN USF2 DPF2 FOS EP300 ZNF507 PTPN12 LOC105375368 PHTF2 GC07P077851
GH07J078040 Enhancer 0.6 ENCODE 11.2 +50.0 49995 0.2 CTCF RB1 L3MBTL2 TEAD4 BHLHE40 TRIM22 REST RAD21 CC2D1A SKIL LOC105375368 GC07M077998 ENSG00000281008
GH07J078041 Enhancer 0.6 ENCODE 11.1 +50.3 50315 0.2 CTCF USF1 L3MBTL2 ZNF335 SKIL ZFHX2 ZBTB33 PRDM10 LOC105375368 GC07M077998 ENSG00000281008
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105375368 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375368 Gene

Genomic Locations for LOC105375368 Gene
chr7:77,990,384-77,996,366
(GRCh38/hg38)
Size:
5,983 bases
Orientation:
Plus strand
chr7:77,619,701-77,624,488
(GRCh37/hg19)
Size:
4,788 bases
Orientation:
Plus strand

Genomic View for LOC105375368 Gene

Genes around LOC105375368 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375368 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375368 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375368 Gene

Proteins for LOC105375368 Gene

Post-translational modifications for LOC105375368 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375368 Gene

Domains & Families for LOC105375368 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375368 Gene

Function for LOC105375368 Gene

Phenotypes From GWAS Catalog for LOC105375368 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375368 Gene

Localization for LOC105375368 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375368 Gene

Pathways & Interactions for LOC105375368 Gene

SuperPathways for LOC105375368 Gene

No Data Available

Interacting Proteins for LOC105375368 Gene

Gene Ontology (GO) - Biological Process for LOC105375368 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375368 Gene

Drugs & Compounds for LOC105375368 Gene

No Compound Related Data Available

Transcripts for LOC105375368 Gene

mRNA/cDNA for LOC105375368 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375368 Gene

No ASD Table

Relevant External Links for LOC105375368 Gene

GeneLoc Exon Structure for
LOC105375368

Expression for LOC105375368 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375368 Gene

Orthologs for LOC105375368 Gene

Evolution for LOC105375368 Gene

ENSEMBL:
Gene Tree for LOC105375368 (if available)
TreeFam:
Gene Tree for LOC105375368 (if available)

No data available for Orthologs for LOC105375368 Gene

Paralogs for LOC105375368 Gene

No data available for Paralogs for LOC105375368 Gene

Variants for LOC105375368 Gene

Sequence variations from dbSNP and Humsavar for LOC105375368 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000284922 -- 77,991,296(+) C/G intron_variant
rs1000505732 -- 77,990,158(+) G/A upstream_transcript_variant
rs1000751134 -- 77,996,132(+) C/T non_coding_transcript_variant
rs1000962582 -- 77,994,916(+) A/G non_coding_transcript_variant
rs1001776299 -- 77,991,252(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375368 Gene

Disorders for LOC105375368 Gene

Additional Disease Information for LOC105375368

No disorders were found for LOC105375368 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105375368 Gene

Publications for LOC105375368 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC105375368 Gene

Sources for LOC105375368 Gene

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