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Aliases for LOC105375340 Gene

Subcategory (RNA class) for LOC105375340 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375340 Gene

  • Uncharacterized LOC105375340 3

External Ids for LOC105375340 Gene

Previous GeneCards Identifiers for LOC105375340 Gene

  • GC07U904353

Summaries for LOC105375340 Gene

GeneCards Summary for LOC105375340 Gene

LOC105375340 (Uncharacterized LOC105375340) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375340 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375340 Gene

Genomics for LOC105375340 Gene

GeneHancer (GH) Regulatory Elements for LOC105375340 Gene

Promoters and enhancers for LOC105375340 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J067604 Enhancer 0.5 FANTOM5 650.7 -0.5 -539 0.1 MITF USF1 ZNF143 ZNF444 KDM5A TRIM28 LOC105375340 MTATP6P21
GH07J067625 Enhancer 0.7 Ensembl 0.3 -21.0 -21036 0.6 CTCF MAX ZNF2 RAD21 CTBP1 GATA3 VEZF1 ZNF143 SMC3 RCOR1 MTATP6P21 LOC105375340
GH07J067618 Enhancer 0.5 ENCODE 0.4 -14.9 -14862 1.2 CTCF POLR2A RCOR1 CHD2 STAG3L4 LOC100996437 MTATP6P21 LOC105375340
GH07J067484 Enhancer 0.9 Ensembl ENCODE 0.1 +120.0 119957 0.7 CTCF USF1 TEAD4 MAX ZNF384 RAD21 EGR1 ZNF143 SMC3 RCOR1 STAG3L4 LOC100420547 GC07P067381 LOC105375340
GH07J067525 Enhancer 0.3 ENCODE 0.2 +78.7 78731 0.2 POLR2A STAG3L4 LOC105375340 GC07P067381
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375340 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375340 Gene

Genomic Locations for LOC105375340 Gene
chr7:67,595,651-67,604,480
(GRCh38/hg38)
Size:
8,830 bases
Orientation:
Minus strand

Genomic View for LOC105375340 Gene

Genes around LOC105375340 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375340 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375340 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375340 Gene

Proteins for LOC105375340 Gene

Post-translational modifications for LOC105375340 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375340 Gene

Domains & Families for LOC105375340 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375340 Gene

Function for LOC105375340 Gene

Phenotypes From GWAS Catalog for LOC105375340 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375340 Gene

Localization for LOC105375340 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375340 Gene

Pathways & Interactions for LOC105375340 Gene

SuperPathways for LOC105375340 Gene

No Data Available

Interacting Proteins for LOC105375340 Gene

Gene Ontology (GO) - Biological Process for LOC105375340 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375340 Gene

Drugs & Compounds for LOC105375340 Gene

No Compound Related Data Available

Transcripts for LOC105375340 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375340 Gene

No ASD Table

Relevant External Links for LOC105375340 Gene

GeneLoc Exon Structure for
LOC105375340

No data available for mRNA/cDNA for LOC105375340 Gene

Expression for LOC105375340 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375340 Gene

Orthologs for LOC105375340 Gene

No data available for Orthologs and Evolution for LOC105375340 Gene

Paralogs for LOC105375340 Gene

No data available for Paralogs for LOC105375340 Gene

Variants for LOC105375340 Gene

Sequence variations from dbSNP and Humsavar for LOC105375340 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000002390 -- 67,579,168(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000307392 -- 67,584,483(-) A/G genic_downstream_transcript_variant, intron_variant
rs1000319714 -- 67,601,240(-) C/T intron_variant
rs1000334482 -- 67,592,900(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000366989 -- 67,593,143(-) C/T genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375340 Gene

Disorders for LOC105375340 Gene

No disorders were found for LOC105375340 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375340 Gene

Publications for LOC105375340 Gene

No publications were found for LOC105375340 Gene.

Products for LOC105375340 Gene

Sources for LOC105375340 Gene

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