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Aliases for LOC105375334 Gene

Subcategory (RNA class) for LOC105375334 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375334 Gene

  • Uncharacterized LOC105375334 3
  • AC104073.4 5

External Ids for LOC105375334 Gene

Previous GeneCards Identifiers for LOC105375334 Gene

  • GC07U904171
  • GC07P065310

Summaries for LOC105375334 Gene

GeneCards Summary for LOC105375334 Gene

LOC105375334 (Uncharacterized LOC105375334) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375334 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375334 Gene

Genomics for LOC105375334 Gene

GeneHancer (GH) Regulatory Elements for LOC105375334 Gene

Promoters and enhancers for LOC105375334 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J065268 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 650.7 +0.1 99 1.5 PKNOX1 ATF1 ARID4B SIN3A DMAP1 ZNF2 ZNF48 GLIS2 E2F8 SP3 LOC105375334 ZNF92 GTF2IP14 CCT6P3 ZNF117 LOC100419781
GH07J065307 Enhancer 0.8 ENCODE 0.3 +38.5 38535 0.2 PKNOX1 FOXA2 RB1 ZNF2 ZNF48 RAD21 ZNF614 GATA2 ARID2 SCRT2 GC07P065328 LOC100419781 LOC105375334
GH07J065338 Enhancer 0.6 ENCODE 0.2 +69.2 69160 0.8 SRF EBF1 MEF2B DPF2 KLF5 RELA FOXK2 BCL11A TARDBP IKZF1 VKORC1L1 RSL24D1P3 LOC100533634 LOC105375334
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375334 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375334 Gene

Genomic Locations for LOC105375334 Gene
chr7:65,269,374-65,338,614
(GRCh38/hg38)
Size:
69,241 bases
Orientation:
Plus strand

Genomic View for LOC105375334 Gene

Genes around LOC105375334 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375334 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375334 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375334 Gene

Proteins for LOC105375334 Gene

Post-translational modifications for LOC105375334 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375334 Gene

Domains & Families for LOC105375334 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375334 Gene

Function for LOC105375334 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375334 Gene

Localization for LOC105375334 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375334 Gene

Pathways & Interactions for LOC105375334 Gene

SuperPathways for LOC105375334 Gene

No Data Available

Interacting Proteins for LOC105375334 Gene

Gene Ontology (GO) - Biological Process for LOC105375334 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375334 Gene

Drugs & Compounds for LOC105375334 Gene

No Compound Related Data Available

Transcripts for LOC105375334 Gene

mRNA/cDNA for LOC105375334 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375334 Gene

No ASD Table

Relevant External Links for LOC105375334 Gene

GeneLoc Exon Structure for
LOC105375334

Expression for LOC105375334 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375334 Gene

Orthologs for LOC105375334 Gene

Evolution for LOC105375334 Gene

ENSEMBL:
Gene Tree for LOC105375334 (if available)
TreeFam:
Gene Tree for LOC105375334 (if available)

No data available for Orthologs for LOC105375334 Gene

Paralogs for LOC105375334 Gene

No data available for Paralogs for LOC105375334 Gene

Variants for LOC105375334 Gene

Sequence variations from dbSNP and Humsavar for LOC105375334 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000019272 -- 65,277,117(+) T/G genic_upstream_transcript_variant, intron_variant
rs1000038525 -- 65,338,465(+) AGTGAGTGA/AGTGA intron_variant
rs1000098080 -- 65,330,353(+) A/G intron_variant
rs1000098346 -- 65,350,447(+) T/C downstream_transcript_variant
rs1000170423 -- 65,336,461(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375334 Gene

Disorders for LOC105375334 Gene

No disorders were found for LOC105375334 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375334 Gene

Publications for LOC105375334 Gene

No publications were found for LOC105375334 Gene.

Products for LOC105375334 Gene

Sources for LOC105375334 Gene

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