Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105375304 Gene

Subcategory (RNA class) for LOC105375304 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375304 Gene

  • Uncharacterized LOC105375304 3
  • AC004540.2 5

External Ids for LOC105375304 Gene

Previous GeneCards Identifiers for LOC105375304 Gene

  • GC07U904140

Summaries for LOC105375304 Gene

GeneCards Summary for LOC105375304 Gene

LOC105375304 (Uncharacterized LOC105375304) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375304 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375304 Gene

Genomics for LOC105375304 Gene

GeneHancer (GH) Regulatory Elements for LOC105375304 Gene

Promoters and enhancers for LOC105375304 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I026372 Promoter/Enhancer 1.9 UCNEbase Ensembl ENCODE 557.7 +1.9 1859 5.6 HDGF ARID4B SIN3A FEZF1 ZNF2 ZNF302 ZNF143 ZNF548 SP3 REST LOC105375304 HNRNPA2B1 HOXA10-AS HOXA9 CBX3 KIAA0087 C7orf71 SNX10 LOC441204 GC07P026242
GH07I027095 Promoter/Enhancer 3.4 VISTA UCNEbase EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.2 -761.4 -761401 86.3 MLX FEZF1 DMAP1 YY1 ZNF213 ZNF143 SP3 NFYC SSRP1 ZNF610 HOXA2 HOXA9 HOXA10 HOXA1 HOXA3 HOXA6 HOXA4 HOXA5 HOXA7 HNRNPA2B1
GH07I026151 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 9.8 +220.7 220734 9.7 HDGF PKNOX1 SMAD1 SIN3A IRF4 ETS1 ZNF121 POLR2B ZNF766 ZNF207 NFE2L3 HNRNPA2B1 SNX10 CBX3 LOC105375304 ENSG00000273237
GH07I026397 Promoter/Enhancer 1.5 Ensembl ENCODE 12.9 -21.8 -21813 2.9 HDGF PKNOX1 ARNT ZNF2 GLIS2 KLF7 ATF7 RUNX3 SP3 JUNB LOC441204 LOC105375304 C7orf71 LOC105375202 GC07P026242
GH07I026485 Enhancer 1.5 VISTA UCNEbase ENCODE 11.6 -108.7 -108735 1 MXI1 PKNOX1 JUN FEZF1 CTBP1 ZNF350 SMARCC2 RCOR1 CHD2 SMARCC1 LOC105375304 C7orf71 LOC441204 ENSG00000280255 LOC105375202 GC07P026242
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375304 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375304 Gene

Genomic Locations for LOC105375304 Gene
chr7:26,372,144-26,376,794
(GRCh38/hg38)
Size:
4,651 bases
Orientation:
Minus strand
chr7:26,411,764-26,416,321
(GRCh37/hg19)

Genomic View for LOC105375304 Gene

Genes around LOC105375304 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375304 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375304 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375304 Gene

Proteins for LOC105375304 Gene

Post-translational modifications for LOC105375304 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375304 Gene

Domains & Families for LOC105375304 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375304 Gene

Function for LOC105375304 Gene

Phenotypes From GWAS Catalog for LOC105375304 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375304 Gene

Localization for LOC105375304 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375304 Gene

Pathways & Interactions for LOC105375304 Gene

SuperPathways for LOC105375304 Gene

No Data Available

Interacting Proteins for LOC105375304 Gene

Gene Ontology (GO) - Biological Process for LOC105375304 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375304 Gene

Drugs & Compounds for LOC105375304 Gene

No Compound Related Data Available

Transcripts for LOC105375304 Gene

mRNA/cDNA for LOC105375304 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375304 Gene

No ASD Table

Relevant External Links for LOC105375304 Gene

GeneLoc Exon Structure for
LOC105375304

Expression for LOC105375304 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375304 Gene

Orthologs for LOC105375304 Gene

Evolution for LOC105375304 Gene

ENSEMBL:
Gene Tree for LOC105375304 (if available)
TreeFam:
Gene Tree for LOC105375304 (if available)

No data available for Orthologs for LOC105375304 Gene

Paralogs for LOC105375304 Gene

No data available for Paralogs for LOC105375304 Gene

Variants for LOC105375304 Gene

Sequence variations from dbSNP and Humsavar for LOC105375304 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000018577 -- 26,396,995(-) G/A/C genic_upstream_transcript_variant, intron_variant
rs1000572953 -- 26,382,680(-) T/A genic_upstream_transcript_variant, intron_variant
rs1000620753 -- 26,382,408(-) C/T genic_upstream_transcript_variant, intron_variant
rs1001067864 -- 26,388,924(-) T/G genic_upstream_transcript_variant, intron_variant
rs1001074970 -- 26,376,143(-) G/T intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375304 Gene

Disorders for LOC105375304 Gene

Additional Disease Information for LOC105375304

No disorders were found for LOC105375304 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105375304 Gene

Publications for LOC105375304 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 58

Products for LOC105375304 Gene

Sources for LOC105375304 Gene

Content
Loading form....