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Aliases for LOC105375265 Gene

Subcategory (RNA class) for LOC105375265 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375265 Gene

  • Uncharacterized LOC105375265 3
  • AC023669.2 5

External Ids for LOC105375265 Gene

Previous GeneCards Identifiers for LOC105375265 Gene

  • GC07U904355

Summaries for LOC105375265 Gene

GeneCards Summary for LOC105375265 Gene

LOC105375265 (Uncharacterized LOC105375265) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375265 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375265 Gene

Genomics for LOC105375265 Gene

GeneHancer (GH) Regulatory Elements for LOC105375265 Gene

Promoters and enhancers for LOC105375265 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J046290 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 -10.5 -10453 2.8 PKNOX1 SMAD1 RB1 STAT5A BMI1 BATF IRF4 ATF7 FOS ETV6 LOC105375265 ENSG00000229459
GH07J046281 Enhancer 0.8 ENCODE 0.3 -20.3 -20311 1.5 FOXA2 RAD21 YY1 RCOR1 IKZF2 RUNX3 RXRA CEBPB GATAD2B NR2F2 GTF2IP13 LOC105375265 ENSG00000229459 GC07P046344
GH07J046283 Enhancer 0.5 ENCODE 0.4 -17.6 -17643 1.9 FOXA2 CREB1 ATF7 ATF2 LOC105375265 ENSG00000229459 GC07P046344
GH07J046352 Enhancer 0.7 ENCODE 0.2 +50.4 50408 0.1 CTCF MAX EBF1 RAD21 TEAD3 ZBTB48 ZNF143 SMC3 FOSL2 DEK IGFBP3 GC07P046371 LOC105375265
GH07J046286 Enhancer 0.3 ENCODE 0.4 -15.6 -15572 0.1 FOS LOC105375265 ENSG00000229459 GC07P046344
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375265 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375265 Gene

Genomic Locations for LOC105375265 Gene
chr7:46,302,120-46,353,154
(GRCh38/hg38)
Size:
51,035 bases
Orientation:
Plus strand
chr7:46,341,718-46,383,219
(GRCh37/hg19)
Size:
41,502 bases
Orientation:
Plus strand

Genomic View for LOC105375265 Gene

Genes around LOC105375265 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375265 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375265 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375265 Gene

Proteins for LOC105375265 Gene

Post-translational modifications for LOC105375265 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375265 Gene

Domains & Families for LOC105375265 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375265 Gene

Function for LOC105375265 Gene

Phenotypes From GWAS Catalog for LOC105375265 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375265 Gene

Localization for LOC105375265 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375265 Gene

Pathways & Interactions for LOC105375265 Gene

SuperPathways for LOC105375265 Gene

No Data Available

Interacting Proteins for LOC105375265 Gene

Gene Ontology (GO) - Biological Process for LOC105375265 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375265 Gene

Drugs & Compounds for LOC105375265 Gene

No Compound Related Data Available

Transcripts for LOC105375265 Gene

mRNA/cDNA for LOC105375265 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375265 Gene

No ASD Table

Relevant External Links for LOC105375265 Gene

GeneLoc Exon Structure for
LOC105375265

Expression for LOC105375265 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375265 Gene

Orthologs for LOC105375265 Gene

Evolution for LOC105375265 Gene

ENSEMBL:
Gene Tree for LOC105375265 (if available)
TreeFam:
Gene Tree for LOC105375265 (if available)

No data available for Orthologs for LOC105375265 Gene

Paralogs for LOC105375265 Gene

No data available for Paralogs for LOC105375265 Gene

Variants for LOC105375265 Gene

Sequence variations from dbSNP and Humsavar for LOC105375265 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000017506 -- 46,350,126(+) G/C intron_variant
rs1000027741 -- 46,336,993(+) T/G genic_upstream_transcript_variant, intron_variant
rs1000098819 -- 46,331,161(+) T/C genic_upstream_transcript_variant, intron_variant
rs1000169212 -- 46,351,188(+) T/C non_coding_transcript_variant
rs1000181514 -- 46,304,600(+) A/C genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375265 Gene

Disorders for LOC105375265 Gene

No disorders were found for LOC105375265 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375265 Gene

Publications for LOC105375265 Gene

No publications were found for LOC105375265 Gene.

Products for LOC105375265 Gene

Sources for LOC105375265 Gene

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