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Aliases for LOC105375258 Gene

Subcategory (RNA class) for LOC105375258 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375258 Gene

  • Uncharacterized LOC105375258 3

External Ids for LOC105375258 Gene

Previous GeneCards Identifiers for LOC105375258 Gene

  • GC07U904055

Summaries for LOC105375258 Gene

GeneCards Summary for LOC105375258 Gene

LOC105375258 (Uncharacterized LOC105375258) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105375258 include Maturity-Onset Diabetes Of The Young, Type 2 and Hyperinsulinemic Hypoglycemia, Familial, 3.

Additional gene information for LOC105375258 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375258 Gene

Genomics for LOC105375258 Gene

GeneHancer (GH) Regulatory Elements for LOC105375258 Gene

Promoters and enhancers for LOC105375258 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J044145 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 650.7 -0.6 -580 2.5 HDGF PKNOX1 SMAD1 ATF1 ARNT TCF12 GATA2 ATF7 NCOA1 REST GCK LOC105375258 POLD2 MYL7
GH07J044146 Promoter/Enhancer 1.2 EPDnew ENCODE dbSUPER 0.7 -2.1 -2100 0.2 ZNF263 SUZ12 MAX ZBTB33 EZH2 MYL7 DDX56 SNHG15 TMED4 POLM SNORA5C LOC105375258 GCK
GH07J044149 Enhancer 0.8 ENCODE dbSUPER 0.7 +3.3 3346 2.3 NCOA3 ZNF687 MAZ ESRRA BHLHE40 ZSCAN4 MNT ATF2 SREBF1 ZNF217 LOC105375258 LOC105375257 GCK
GH07J044159 Promoter/Enhancer 1 EPDnew dbSUPER 0.4 +11.6 11635 0.1 SP1 RXRA MAX HNF4A RAD21 GCK RNA5SP230 POLD2 AEBP1 POLM ENSG00000239775 PGAM2 LOC105375257 LOC105375258
GH07J044162 Enhancer 0.7 ENCODE 0.4 +14.8 14750 0.2 FOXA2 MAX CEBPG RAD21 YY1 EGR1 HNF4G RXRA CEBPB REST MYL7 POLD2 RNA5SP230 AEBP1 POLM ENSG00000239775 PGAM2 LOC105375257 LOC105375258 GCK
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105375258 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375258 Gene

Genomic Locations for LOC105375258 Gene
chr7:44,147,667-44,149,773
(GRCh38/hg38)
Size:
2,107 bases
Orientation:
Plus strand

Genomic View for LOC105375258 Gene

Genes around LOC105375258 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375258 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375258 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375258 Gene

Proteins for LOC105375258 Gene

Post-translational modifications for LOC105375258 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375258 Gene

Domains & Families for LOC105375258 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375258 Gene

Function for LOC105375258 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375258 Gene

Localization for LOC105375258 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375258 Gene

Pathways & Interactions for LOC105375258 Gene

SuperPathways for LOC105375258 Gene

No Data Available

Interacting Proteins for LOC105375258 Gene

Gene Ontology (GO) - Biological Process for LOC105375258 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375258 Gene

Drugs & Compounds for LOC105375258 Gene

No Compound Related Data Available

Transcripts for LOC105375258 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375258 Gene

No ASD Table

Relevant External Links for LOC105375258 Gene

GeneLoc Exon Structure for
LOC105375258

No data available for mRNA/cDNA for LOC105375258 Gene

Expression for LOC105375258 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375258 Gene

Orthologs for LOC105375258 Gene

No data available for Orthologs and Evolution for LOC105375258 Gene

Paralogs for LOC105375258 Gene

No data available for Paralogs for LOC105375258 Gene

Variants for LOC105375258 Gene

Sequence variations from dbSNP and Humsavar for LOC105375258 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs104894005 pathogenic, uncertain-significance, Maturity-onset diabetes of the young, type 2, not specified 44,147,678(+) C/A/G/T non_coding_transcript_variant
rs104894006 pathogenic, Diabetes mellitus, noninsulin-dependent, late-onset, not provided 44,149,992(+) G/A/T downstream_transcript_variant
rs104894008 pathogenic, not provided, Maturity-onset diabetes of the young, type 2 44,147,732(+) C/G/T non_coding_transcript_variant
rs104894009 pathogenic, Maturity-onset diabetes of the young, type 2 44,146,587(+) C/G upstream_transcript_variant
rs104894011 pathogenic, Maturity-onset diabetes of the young, type 2, not provided 44,147,720(+) C/A/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375258 Gene

Disorders for LOC105375258 Gene

MalaCards: The human disease database

(3) MalaCards diseases for LOC105375258 Gene - From: GeneCards

- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105375258: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375258 Gene

Publications for LOC105375258 Gene

No publications were found for LOC105375258 Gene.

Products for LOC105375258 Gene

Sources for LOC105375258 Gene

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