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Aliases for LOC105375257 Gene

Subcategory (RNA class) for LOC105375257 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375257 Gene

  • Uncharacterized LOC105375257 3

External Ids for LOC105375257 Gene

Previous GeneCards Identifiers for LOC105375257 Gene

  • GC07U904138

Summaries for LOC105375257 Gene

GeneCards Summary for LOC105375257 Gene

LOC105375257 (Uncharacterized LOC105375257) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375257 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375257 Gene

Genomics for LOC105375257 Gene

GeneHancer (GH) Regulatory Elements for LOC105375257 Gene

Promoters and enhancers for LOC105375257 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J044172 Enhancer 0.4 dbSUPER 650.7 +0.3 255 1.1 ZSCAN5C PRDM10 LOC105375257 URGCP YKT6 GCK
GH07J044175 Enhancer 0.7 dbSUPER 0.7 +4.7 4679 3.3 ZBTB21 MZF1 ZIC2 ZNF335 ZFHX2 ZBTB48 PATZ1 SCRT2 PRDM10 FOS DDX56 PURB GCK URGCP YKT6 LOC105375257
GH07J044159 Promoter/Enhancer 1 EPDnew dbSUPER 0.4 -13.1 -13073 0.1 SP1 RXRA MAX HNF4A RAD21 GCK RNA5SP230 POLD2 AEBP1 POLM PGAM2 ENSG00000239775 LOC105375258 LOC105375257
GH07J044184 Enhancer 1 ENCODE dbSUPER 0.4 +12.7 12662 1.8 YBX3 KLF17 SIN3A GLI4 RFX5 ZNF366 SCRT2 RCOR1 FOS MTA1 ENSG00000228680 POLM SNORA5C DDX56 SNORA5B ENSG00000228434 TMED4 SNORA5A ENSG00000228596 RPL18AP10
GH07J044189 Promoter/Enhancer 1 EPDnew dbSUPER 0.4 +17.1 17084 0.1 MXI1 RFX1 POLR2A BMI1 GCK LOC105375257
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105375257 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375257 Gene

Genomic Locations for LOC105375257 Gene
chr7:44,172,375-44,184,141
(GRCh38/hg38)
Size:
11,767 bases
Orientation:
Plus strand

Genomic View for LOC105375257 Gene

Genes around LOC105375257 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375257 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375257 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375257 Gene

Proteins for LOC105375257 Gene

Post-translational modifications for LOC105375257 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375257 Gene

Domains & Families for LOC105375257 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375257 Gene

Function for LOC105375257 Gene

Phenotypes From GWAS Catalog for LOC105375257 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375257 Gene

Localization for LOC105375257 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375257 Gene

Pathways & Interactions for LOC105375257 Gene

SuperPathways for LOC105375257 Gene

No Data Available

Interacting Proteins for LOC105375257 Gene

Gene Ontology (GO) - Biological Process for LOC105375257 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375257 Gene

Drugs & Compounds for LOC105375257 Gene

No Compound Related Data Available

Transcripts for LOC105375257 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375257 Gene

No ASD Table

Relevant External Links for LOC105375257 Gene

GeneLoc Exon Structure for
LOC105375257

No data available for mRNA/cDNA for LOC105375257 Gene

Expression for LOC105375257 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375257 Gene

Orthologs for LOC105375257 Gene

No data available for Orthologs and Evolution for LOC105375257 Gene

Paralogs for LOC105375257 Gene

No data available for Paralogs for LOC105375257 Gene

Variants for LOC105375257 Gene

Sequence variations from dbSNP and Humsavar for LOC105375257 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000076673 -- 44,183,329(+) G/A non_coding_transcript_variant
rs1000145377 -- 44,173,032(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000542449 -- 44,175,691(+) A/G genic_upstream_transcript_variant, intron_variant
rs1000562927 -- 44,181,501(+) A/G intron_variant, non_coding_transcript_variant
rs1000772120 -- 44,182,530(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375257 Gene

Disorders for LOC105375257 Gene

No disorders were found for LOC105375257 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375257 Gene

Publications for LOC105375257 Gene

No publications were found for LOC105375257 Gene.

Products for LOC105375257 Gene

Sources for LOC105375257 Gene

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