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Aliases for LOC105375254 Gene

Aliases for LOC105375254 Gene

  • Uncharacterized LOC105375254 3
  • AC005537.1 5

External Ids for LOC105375254 Gene

Previous GeneCards Identifiers for LOC105375254 Gene

  • GC07U904204

Summaries for LOC105375254 Gene

GeneCards Summary for LOC105375254 Gene

LOC105375254 (Uncharacterized LOC105375254) is a Protein Coding gene.

Additional gene information for LOC105375254 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375254 Gene

Genomics for LOC105375254 Gene

GeneHancer (GH) Regulatory Elements for LOC105375254 Gene

Promoters and enhancers for LOC105375254 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I043112 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 563 +0.8 760 1.7 RB1 KLF17 MZF1 SIN3A ZNF2 ZNF335 GLIS2 KLF7 EGR2 SP3 LOC105375254 HECW1 AEBP1 GLI3 ENSG00000228434 SPDYE1 POLM
GH07I043037 Enhancer 0.5 ENCODE 17.8 +75.8 75772 1.6 ATF4 JUND TRIM24 MGA ZNF592 LOC105375254 GC07P043096 LOC105375253
GH07I043071 Enhancer 0.6 ENCODE 14.2 +41.5 41473 1.7 CTCF REST ZNF592 CHAMP1 CC2D1A MTA3 SMARCA4 IKZF1 ZNF143 ZBTB33 LOC105375254 HECW1 HECW1-IT1 GC07P043096 LOC105375253
GH07I043078 Enhancer 1 FANTOM5 ENCODE 5.1 +36.0 35998 1.2 MAFG DPF2 ZBTB40 E4F1 GABPA FOSL1 MAFF ZNF316 POLR2A GABPB1 HECW1 HECW1-IT1 ENSG00000228680 LOC105375254 GC07P043096 LOC105375253
GH07I043073 Enhancer 0.3 ENCODE 7.7 +40.5 40491 0.1 IKZF1 HECW1 HECW1-IT1 LOC105375254 GC07P043096 LOC105375253
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375254 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375254 Gene

Genomic Locations for LOC105375254 Gene
chr7:42,954,135-43,113,931
(GRCh38/hg38)
Size:
159,797 bases
Orientation:
Minus strand
chr7:42,993,734-43,099,149
(GRCh37/hg19)

Genomic View for LOC105375254 Gene

Genes around LOC105375254 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375254 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375254 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375254 Gene

Proteins for LOC105375254 Gene

Post-translational modifications for LOC105375254 Gene

No Post-translational modifications

Other Protein References for LOC105375254 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC105375254 Gene

Domains & Families for LOC105375254 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375254 Gene

Function for LOC105375254 Gene

Phenotypes From GWAS Catalog for LOC105375254 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375254 Gene

Localization for LOC105375254 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375254 Gene

Pathways & Interactions for LOC105375254 Gene

SuperPathways for LOC105375254 Gene

No Data Available

Interacting Proteins for LOC105375254 Gene

Gene Ontology (GO) - Biological Process for LOC105375254 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375254 Gene

Drugs & Compounds for LOC105375254 Gene

No Compound Related Data Available

Transcripts for LOC105375254 Gene

mRNA/cDNA for LOC105375254 Gene

(2) REFSEQ mRNAs :
(10) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375254 Gene

No ASD Table

Relevant External Links for LOC105375254 Gene

GeneLoc Exon Structure for
LOC105375254

Expression for LOC105375254 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375254 Gene

Orthologs for LOC105375254 Gene

Evolution for LOC105375254 Gene

ENSEMBL:
Gene Tree for LOC105375254 (if available)
TreeFam:
Gene Tree for LOC105375254 (if available)

No data available for Orthologs for LOC105375254 Gene

Paralogs for LOC105375254 Gene

No data available for Paralogs for LOC105375254 Gene

Variants for LOC105375254 Gene

Sequence variations from dbSNP and Humsavar for LOC105375254 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000012997 -- 43,104,409(-) C/T genic_upstream_transcript_variant, intron_variant
rs1000059528 -- 43,114,033(-) T/G genic_upstream_transcript_variant, initiator_codon_variant, missense_variant
rs1000060624 -- 43,057,665(-) C/T intron_variant
rs1000091936 -- 43,114,296(-) A/G upstream_transcript_variant
rs1000119631 -- 43,031,863(-) G/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375254 Gene

Disorders for LOC105375254 Gene

No disorders were found for LOC105375254 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375254 Gene

Publications for LOC105375254 Gene

No publications were found for LOC105375254 Gene.

Products for LOC105375254 Gene

Sources for LOC105375254 Gene

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