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Aliases for LOC105375242 Gene

Subcategory (RNA class) for LOC105375242 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375242 Gene

  • Uncharacterized LOC105375242 3

External Ids for LOC105375242 Gene

Previous GeneCards Identifiers for LOC105375242 Gene

  • GC07U903993

Summaries for LOC105375242 Gene

GeneCards Summary for LOC105375242 Gene

LOC105375242 (Uncharacterized LOC105375242) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375242 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375242 Gene

Genomics for LOC105375242 Gene

GeneHancer (GH) Regulatory Elements for LOC105375242 Gene

Promoters and enhancers for LOC105375242 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I040898 Enhancer 0.9 FANTOM5 ENCODE 0.8 +2.5 2519 2.3 MXI1 MAX RAD21 BRCA1 RFX5 GATA3 POLR2A SMC3 RCOR1 CHD2 LOC105375242 ENSG00000227658
GH07I040917 Enhancer 0.8 Ensembl ENCODE 0.4 -16.5 -16482 2.6 PKNOX1 SMARCC1 DPF2 EP300 RAD21 JUND IKZF1 ATF7 IKZF2 LOC105375242 LINC01450
GH07I040921 Enhancer 0.9 FANTOM5 ENCODE 0.3 -20.5 -20458 2.9 JUN MAX CEBPB EP300 RAD21 ZFHX2 JUND STAT3 SMC3 FOS LINC01449 LOC105375242 LINC01450
GH07I040914 Enhancer 0.5 ENCODE 0.4 -13.1 -13100 1.5 STAT1 JUND JUN STAT3 CEBPB EP300 NFE2L2 LOC105375242 LINC01450
GH07I040897 Enhancer 0.2 FANTOM5 0.8 +4.4 4434 0.3 LOC105375242 ENSG00000227658
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375242 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375242 Gene

Genomic Locations for LOC105375242 Gene
chr7:40,858,425-40,902,292
(GRCh38/hg38)
Size:
43,868 bases
Orientation:
Minus strand

Genomic View for LOC105375242 Gene

Genes around LOC105375242 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375242 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375242 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375242 Gene

Proteins for LOC105375242 Gene

Post-translational modifications for LOC105375242 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375242 Gene

Domains & Families for LOC105375242 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375242 Gene

Function for LOC105375242 Gene

Phenotypes From GWAS Catalog for LOC105375242 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375242 Gene

Localization for LOC105375242 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375242 Gene

Pathways & Interactions for LOC105375242 Gene

SuperPathways for LOC105375242 Gene

No Data Available

Interacting Proteins for LOC105375242 Gene

Gene Ontology (GO) - Biological Process for LOC105375242 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375242 Gene

Drugs & Compounds for LOC105375242 Gene

No Compound Related Data Available

Transcripts for LOC105375242 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375242 Gene

No ASD Table

Relevant External Links for LOC105375242 Gene

GeneLoc Exon Structure for
LOC105375242

No data available for mRNA/cDNA for LOC105375242 Gene

Expression for LOC105375242 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375242 Gene

Orthologs for LOC105375242 Gene

No data available for Orthologs and Evolution for LOC105375242 Gene

Paralogs for LOC105375242 Gene

No data available for Paralogs for LOC105375242 Gene

Variants for LOC105375242 Gene

Sequence variations from dbSNP and Humsavar for LOC105375242 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000137467 -- 40,890,207(-) T/ intron_variant
rs1000167277 -- 40,860,058(-) C/A non_coding_transcript_variant
rs1000222830 -- 40,860,370(-) T/A intron_variant
rs1000237887 -- 40,867,296(-) A/G intron_variant
rs1000247019 -- 40,902,835(-) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375242 Gene

Disorders for LOC105375242 Gene

No disorders were found for LOC105375242 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375242 Gene

Publications for LOC105375242 Gene

No publications were found for LOC105375242 Gene.

Products for LOC105375242 Gene

Sources for LOC105375242 Gene

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