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Aliases for LOC105375241 Gene

Subcategory (RNA class) for LOC105375241 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375241 Gene

  • Uncharacterized LOC105375241 3

External Ids for LOC105375241 Gene

Previous GeneCards Identifiers for LOC105375241 Gene

  • GC07U904209

Summaries for LOC105375241 Gene

GeneCards Summary for LOC105375241 Gene

LOC105375241 (Uncharacterized LOC105375241) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375241 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375241 Gene

Genomics for LOC105375241 Gene

GeneHancer (GH) Regulatory Elements for LOC105375241 Gene

Promoters and enhancers for LOC105375241 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I041145 Enhancer 0.9 ENCODE dbSUPER 550.8 +1.8 1758 4.4 JUN RAD21 RFX5 CTBP1 GATA3 FOS ZBTB20 CEBPB USF2 ZNF398 LOC105375241 LINC01449
GH07I041134 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 +15.3 15294 0.6 PKNOX1 EBF1 BATF IRF4 RELA POLR2A NFATC1 ATF7 ETV6 ZNF600 LOC105375241 LINC01449
GH07I041106 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +40.6 40636 5.8 JUN BATF CTBP1 GATA3 ELK1 POLR2A SCRT2 SMC3 SMARCC2 RCOR1 LINC01449 LOC105375241
GH07I041186 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -39.3 -39287 4.9 PKNOX1 CLOCK FOXA2 ZNF449 JUN MAX NEUROD1 ZFHX2 CTBP1 GATA3 GC07P041217 LOC105375241
GH07I041113 Enhancer 0.8 ENCODE dbSUPER 0.3 +33.7 33692 5.4 SMARCE1 CTCF DPF2 FOXA1 ZNF217 GATA3 POLR2A RCOR1 TCF7L2 EZH2 LINC01449 LOC105375241
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375241 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375241 Gene

Genomic Locations for LOC105375241 Gene
chr7:41,108,868-41,149,795
(GRCh38/hg38)
Size:
40,928 bases
Orientation:
Minus strand

Genomic View for LOC105375241 Gene

Genes around LOC105375241 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375241 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375241 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375241 Gene

Proteins for LOC105375241 Gene

Post-translational modifications for LOC105375241 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375241 Gene

Domains & Families for LOC105375241 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375241 Gene

Function for LOC105375241 Gene

Phenotypes From GWAS Catalog for LOC105375241 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375241 Gene

Localization for LOC105375241 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375241 Gene

Pathways & Interactions for LOC105375241 Gene

SuperPathways for LOC105375241 Gene

No Data Available

Interacting Proteins for LOC105375241 Gene

Gene Ontology (GO) - Biological Process for LOC105375241 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375241 Gene

Drugs & Compounds for LOC105375241 Gene

No Compound Related Data Available

Transcripts for LOC105375241 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375241 Gene

No ASD Table

Relevant External Links for LOC105375241 Gene

GeneLoc Exon Structure for
LOC105375241

No data available for mRNA/cDNA for LOC105375241 Gene

Expression for LOC105375241 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375241 Gene

Orthologs for LOC105375241 Gene

No data available for Orthologs and Evolution for LOC105375241 Gene

Paralogs for LOC105375241 Gene

No data available for Paralogs for LOC105375241 Gene

Variants for LOC105375241 Gene

Sequence variations from dbSNP and Humsavar for LOC105375241 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000012323 -- 41,116,137(-) T/G intron_variant
rs1000047697 -- 41,109,553(-) C/T non_coding_transcript_variant
rs1000095175 -- 41,150,500(-) C/T upstream_transcript_variant
rs1000164922 -- 41,142,526(-) T/A intron_variant
rs1000288282 -- 41,127,504(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375241 Gene

Disorders for LOC105375241 Gene

No disorders were found for LOC105375241 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375241 Gene

Publications for LOC105375241 Gene

No publications were found for LOC105375241 Gene.

Products for LOC105375241 Gene

Sources for LOC105375241 Gene

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