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Aliases for LOC105375240 Gene

Subcategory (RNA class) for LOC105375240 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375240 Gene

  • Uncharacterized LOC105375240 3
  • AC011290.1 5

External Ids for LOC105375240 Gene

Previous GeneCards Identifiers for LOC105375240 Gene

  • GC07U903901

Summaries for LOC105375240 Gene

GeneCards Summary for LOC105375240 Gene

LOC105375240 (Uncharacterized LOC105375240) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375240 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375240 Gene

Genomics for LOC105375240 Gene

GeneHancer (GH) Regulatory Elements for LOC105375240 Gene

Promoters and enhancers for LOC105375240 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I039565 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 550.8 -0.1 -109 1.9 HDGF PKNOX1 SMAD1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B LOC105375240 YAE1D1 CDK13 MPLKIP RALA LINC00265 GC07M039569
GH07I039732 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE 11.3 -167.8 -167843 3.8 HDGF PKNOX1 FOXA2 SMAD1 ARNT SIN3A FEZF1 IRF4 E2F8 ZNF207 LINC00265 CDK13 CICP22 ENSG00000228554 RALA LOC105375240 YAE1D1 MPLKIP RNU6-719P
GH07I039588 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -23.4 -23447 3.3 PKNOX1 SMAD1 ARNT FEZF1 IRF4 ZNF766 ZNF207 FOS JUNB REST RALA LOC105375240 YAE1D1 LINC00265 GC07P039582 GC07P039609
GH07I039607 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 10.9 -43.0 -43011 4.5 HDAC1 CTCF JUN ETV1 TAL1 ZBTB40 GATA3 POLR2A RCOR1 EZH2 ENSG00000106540 ENSG00000231951 GC07P039609 LOC646999 YAE1D1 LOC105375240 RALA GC07P039582
GH07I039613 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 10.3 -47.6 -47607 1.6 MEIS2 PKNOX1 TAL1 CEBPB CBFA2T3 DPF2 TCF12 JUND NCOR1 ZNF184 YAE1D1 LOC105375240 RALA ENSG00000231951 GC07P039617
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375240 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375240 Gene

Genomic Locations for LOC105375240 Gene
chr7:39,545,646-39,566,353
(GRCh38/hg38)
Size:
20,708 bases
Orientation:
Minus strand
chr7:39,585,245-39,605,838
(GRCh37/hg19)

Genomic View for LOC105375240 Gene

Genes around LOC105375240 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375240 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375240 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375240 Gene

Proteins for LOC105375240 Gene

Post-translational modifications for LOC105375240 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375240 Gene

Domains & Families for LOC105375240 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375240 Gene

Function for LOC105375240 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375240 Gene

Localization for LOC105375240 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375240 Gene

Pathways & Interactions for LOC105375240 Gene

SuperPathways for LOC105375240 Gene

No Data Available

Interacting Proteins for LOC105375240 Gene

Gene Ontology (GO) - Biological Process for LOC105375240 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375240 Gene

Drugs & Compounds for LOC105375240 Gene

No Compound Related Data Available

Transcripts for LOC105375240 Gene

mRNA/cDNA for LOC105375240 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375240 Gene

No ASD Table

Relevant External Links for LOC105375240 Gene

GeneLoc Exon Structure for
LOC105375240

Expression for LOC105375240 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375240 Gene

Orthologs for LOC105375240 Gene

Evolution for LOC105375240 Gene

ENSEMBL:
Gene Tree for LOC105375240 (if available)
TreeFam:
Gene Tree for LOC105375240 (if available)

No data available for Orthologs for LOC105375240 Gene

Paralogs for LOC105375240 Gene

No data available for Paralogs for LOC105375240 Gene

Variants for LOC105375240 Gene

Sequence variations from dbSNP and Humsavar for LOC105375240 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000283518 -- 39,553,275(-) C/T downstream_transcript_variant, genic_downstream_transcript_variant, intron_variant
rs1000539964 -- 39,561,717(-) C/A intron_variant
rs1000605168 -- 39,560,261(-) T/C intron_variant
rs1000668496 -- 39,554,660(-) A/C intron_variant
rs1000747339 -- 39,565,088(-) A/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375240 Gene

Disorders for LOC105375240 Gene

Additional Disease Information for LOC105375240

No disorders were found for LOC105375240 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105375240 Gene

Publications for LOC105375240 Gene

No publications were found for LOC105375240 Gene.

Products for LOC105375240 Gene

Sources for LOC105375240 Gene

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