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Aliases for LOC105375228 Gene

Subcategory (RNA class) for LOC105375228 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375228 Gene

  • Uncharacterized LOC105375228 3

External Ids for LOC105375228 Gene

Previous GeneCards Identifiers for LOC105375228 Gene

  • GC07U904237

Summaries for LOC105375228 Gene

GeneCards Summary for LOC105375228 Gene

LOC105375228 (Uncharacterized LOC105375228) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375228 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375228 Gene

Genomics for LOC105375228 Gene

GeneHancer (GH) Regulatory Elements for LOC105375228 Gene

Promoters and enhancers for LOC105375228 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I035034 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 550.8 +1.8 1786 3.7 PKNOX1 ARID4B SIN3A ZNF2 YY1 ZNF213 ZNF207 ZNF143 REST KAT8 DPY19L1 LOC105375228 GC07M034966
GH07I035024 Enhancer 1 ENCODE dbSUPER 0.4 -9.1 -9093 3 NFIB ZFP64 SIN3A RFX5 ZNF213 ATF7 ETV6 FOS RUNX3 EGR2 DPY19L1 LOC105375228 GC07M034966 MIR548N
GH07I035002 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -30.8 -30775 3.4 PKNOX1 ATF1 SIN3A FEZF1 TCF12 ZNF416 FOS TSHZ1 ZNF592 ZNF610 DPY19L1 LOC105375228 GC07M034966 MIR548N
GH07I035014 Enhancer 0.9 ENCODE dbSUPER 0.4 -19.5 -19469 1.5 HDAC1 ATF1 PKNOX1 GTF2E2 ETV1 BACH1 ZBTB40 FOSL1 GATA3 CTBP1 DPY19L1 LOC105375228 GC07M034966 MIR548N
GH07I034990 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -43.2 -43231 2.3 JUN MAX BATF E4F1 ZNF7 FOSL1 ZNF143 SRF SMARCA5 ZNF687 DPY19L1 LOC105375228 MIR548N GC07M034966
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375228 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375228 Gene

Genomic Locations for LOC105375228 Gene
chr7:35,035,034-35,036,050
(GRCh38/hg38)
Size:
1,017 bases
Orientation:
Plus strand

Genomic View for LOC105375228 Gene

Genes around LOC105375228 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375228 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375228 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375228 Gene

Proteins for LOC105375228 Gene

Post-translational modifications for LOC105375228 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375228 Gene

Domains & Families for LOC105375228 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375228 Gene

Function for LOC105375228 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375228 Gene

Localization for LOC105375228 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375228 Gene

Pathways & Interactions for LOC105375228 Gene

SuperPathways for LOC105375228 Gene

No Data Available

Interacting Proteins for LOC105375228 Gene

Gene Ontology (GO) - Biological Process for LOC105375228 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375228 Gene

Drugs & Compounds for LOC105375228 Gene

No Compound Related Data Available

Transcripts for LOC105375228 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375228 Gene

No ASD Table

Relevant External Links for LOC105375228 Gene

GeneLoc Exon Structure for
LOC105375228

No data available for mRNA/cDNA for LOC105375228 Gene

Expression for LOC105375228 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375228 Gene

Orthologs for LOC105375228 Gene

No data available for Orthologs and Evolution for LOC105375228 Gene

Paralogs for LOC105375228 Gene

No data available for Paralogs for LOC105375228 Gene

Variants for LOC105375228 Gene

Sequence variations from dbSNP and Humsavar for LOC105375228 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000034926 -- 35,069,589(+) C/T genic_upstream_transcript_variant, intron_variant
rs1000191968 -- 35,069,352(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000219114 -- 35,050,013(+) T/C genic_upstream_transcript_variant, intron_variant
rs1000287500 -- 35,098,606(+) C/G intron_variant
rs1000327796 -- 35,081,917(+) T/C/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375228 Gene

Disorders for LOC105375228 Gene

No disorders were found for LOC105375228 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375228 Gene

Publications for LOC105375228 Gene

No publications were found for LOC105375228 Gene.

Products for LOC105375228 Gene

Sources for LOC105375228 Gene

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