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Aliases for LOC105375216 Gene

Subcategory (RNA class) for LOC105375216 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375216 Gene

  • Uncharacterized LOC105375216 3

External Ids for LOC105375216 Gene

Previous GeneCards Identifiers for LOC105375216 Gene

  • GC07U903852

Summaries for LOC105375216 Gene

GeneCards Summary for LOC105375216 Gene

LOC105375216 (Uncharacterized LOC105375216) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375216 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375216 Gene

Genomics for LOC105375216 Gene

GeneHancer (GH) Regulatory Elements for LOC105375216 Gene

Promoters and enhancers for LOC105375216 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J030133 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 650.7 -0.7 -699 2.9 ATF1 ARID4B DMAP1 BRCA1 ZNF48 GLIS2 E2F8 FOS ATF7 NFYC MTURN LOC105375216 ZNRF2 ENSG00000226874 DKFZP586I1420 ENSG00000263683 PLEKHA8 ENSG00000230751
GH07J030116 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 +17.6 17639 1.3 POLR2A ENSG00000283618 PLEKHA8 ENSG00000231519 FKBP14 LOC105375216
GH07J030121 Enhancer 0.6 dbSUPER 0.4 +12.7 12748 1.7 RXRA MAX REST RAD21 YY1 SP1 JUND ATF3 EGR1 HNF4G MTURN PLEKHA8 ENSG00000283618 LOC105375216
GH07J030123 Enhancer 0.2 dbSUPER 0.4 +10.2 10238 2.3 MTURN ENSG00000283618 LOC105375216 PLEKHA8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375216 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375216 Gene

Genomic Locations for LOC105375216 Gene
chr7:30,130,579-30,134,670
(GRCh38/hg38)
Size:
4,092 bases
Orientation:
Minus strand

Genomic View for LOC105375216 Gene

Genes around LOC105375216 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375216 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375216 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375216 Gene

Proteins for LOC105375216 Gene

Post-translational modifications for LOC105375216 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375216 Gene

Domains & Families for LOC105375216 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375216 Gene

Function for LOC105375216 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375216 Gene

Localization for LOC105375216 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375216 Gene

Pathways & Interactions for LOC105375216 Gene

SuperPathways for LOC105375216 Gene

No Data Available

Interacting Proteins for LOC105375216 Gene

Gene Ontology (GO) - Biological Process for LOC105375216 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375216 Gene

Drugs & Compounds for LOC105375216 Gene

No Compound Related Data Available

Transcripts for LOC105375216 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375216 Gene

No ASD Table

Relevant External Links for LOC105375216 Gene

GeneLoc Exon Structure for
LOC105375216

No data available for mRNA/cDNA for LOC105375216 Gene

Expression for LOC105375216 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375216 Gene

Orthologs for LOC105375216 Gene

No data available for Orthologs and Evolution for LOC105375216 Gene

Paralogs for LOC105375216 Gene

No data available for Paralogs for LOC105375216 Gene

Variants for LOC105375216 Gene

Sequence variations from dbSNP and Humsavar for LOC105375216 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000277213 -- 30,134,717(-) T/C non_coding_transcript_variant
rs1000643988 -- 30,134,588(-) C/G intron_variant
rs1000813029 -- 30,133,746(-) A/G intron_variant
rs1000891566 -- 30,131,901(-) G/T intron_variant
rs1001995595 -- 30,133,181(-) G/C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375216 Gene

Disorders for LOC105375216 Gene

No disorders were found for LOC105375216 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375216 Gene

Publications for LOC105375216 Gene

No publications were found for LOC105375216 Gene.

Products for LOC105375216 Gene

Sources for LOC105375216 Gene

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