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Aliases for LOC105375208 Gene

Subcategory (RNA class) for LOC105375208 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375208 Gene

  • Uncharacterized LOC105375208 3

External Ids for LOC105375208 Gene

Previous GeneCards Identifiers for LOC105375208 Gene

  • GC07U903896

Summaries for LOC105375208 Gene

GeneCards Summary for LOC105375208 Gene

LOC105375208 (Uncharacterized LOC105375208) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375208 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375208 Gene

Genomics for LOC105375208 Gene

GeneHancer (GH) Regulatory Elements for LOC105375208 Gene

Promoters and enhancers for LOC105375208 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J028035 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.7 +2.2 2185 8.7 PKNOX1 ATF1 FOXA2 IRF4 ATF7 FOS RUNX3 DEK RXRA JUNB EVX1-AS ENSG00000253308 EVX1 CREB5 LOC105375208 GC07P028046 JAZF1
GH07J028034 Enhancer 0.7 ENCODE 0.7 -2.7 -2732 0.2 ELF3 FOXA2 SIN3A YY1 TEAD3 CTBP1 GATA3 FOSL2 FOS TCF7L2 EVX1 ENSG00000253308 EVX1-AS PIR54187 LOC105375208 JAZF1
GH07J028052 Enhancer 1 FANTOM5 Ensembl ENCODE 0.4 +17.1 17061 4.5 JUN REST ZKSCAN1 SP1 JUND POLR2A FOSL2 MAFK SP7 GC07P028054 EVX1-AS EVX1 ENSG00000253308 HIBADH GC07P028046 LOC105375208 JAZF1
GH07J028061 Enhancer 0.9 Ensembl ENCODE 0.3 +25.0 25038 1.7 CTCF ATF1 ZBTB6 MAX BMI1 ZNF2 RAD21 ZBTB48 ZNF143 SMC3 ENSG00000253508 HOTTIP HOXA13 GC07P028054 LOC105375208 GC07P028093 JAZF1
GH07J028044 Enhancer 0.2 ENCODE 0.4 +7.7 7749 1.2 GC07P028046 LOC105375208 JAZF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375208 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375208 Gene

Genomic Locations for LOC105375208 Gene
chr7:28,037,569-28,063,180
(GRCh38/hg38)
Size:
25,612 bases
Orientation:
Plus strand

Genomic View for LOC105375208 Gene

Genes around LOC105375208 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375208 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375208 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375208 Gene

Proteins for LOC105375208 Gene

Post-translational modifications for LOC105375208 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375208 Gene

Domains & Families for LOC105375208 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375208 Gene

Function for LOC105375208 Gene

Phenotypes From GWAS Catalog for LOC105375208 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375208 Gene

Localization for LOC105375208 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375208 Gene

Pathways & Interactions for LOC105375208 Gene

SuperPathways for LOC105375208 Gene

No Data Available

Interacting Proteins for LOC105375208 Gene

Gene Ontology (GO) - Biological Process for LOC105375208 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375208 Gene

Drugs & Compounds for LOC105375208 Gene

No Compound Related Data Available

Transcripts for LOC105375208 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375208 Gene

No ASD Table

Relevant External Links for LOC105375208 Gene

GeneLoc Exon Structure for
LOC105375208

No data available for mRNA/cDNA for LOC105375208 Gene

Expression for LOC105375208 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375208 Gene

Orthologs for LOC105375208 Gene

No data available for Orthologs and Evolution for LOC105375208 Gene

Paralogs for LOC105375208 Gene

No data available for Paralogs for LOC105375208 Gene

Variants for LOC105375208 Gene

Sequence variations from dbSNP and Humsavar for LOC105375208 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000005943 -- 28,039,752(+) A/G intron_variant
rs1000121555 -- 28,039,264(+) C/T intron_variant
rs1000139846 -- 28,058,374(+) G/A downstream_transcript_variant
rs1000145773 -- 28,039,712(+) C/T intron_variant
rs1000177248 -- 28,039,335(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375208 Gene

Disorders for LOC105375208 Gene

No disorders were found for LOC105375208 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375208 Gene

Publications for LOC105375208 Gene

No publications were found for LOC105375208 Gene.

Products for LOC105375208 Gene

Sources for LOC105375208 Gene

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