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Aliases for LOC105375207 Gene

Subcategory (RNA class) for LOC105375207 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375207 Gene

  • Uncharacterized LOC105375207 3
  • AC004009.1 5

External Ids for LOC105375207 Gene

Previous GeneCards Identifiers for LOC105375207 Gene

  • GC07U904191

Summaries for LOC105375207 Gene

GeneCards Summary for LOC105375207 Gene

LOC105375207 (Uncharacterized LOC105375207) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375207 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375207 Gene

Genomics for LOC105375207 Gene

GeneHancer (GH) Regulatory Elements for LOC105375207 Gene

Promoters and enhancers for LOC105375207 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I027361 Enhancer 0.7 ENCODE 550.8 -0.1 -96 0.4 HDAC1 ETV1 TEAD4 TAL1 CHAMP1 CC2D1A ZNF766 EGR1 POLR2A ZNF282 GC07P027363 LOC105375207 ENSG00000253508 HOTTIP HOXA13 HNRNPA1P73
GH07I027363 Enhancer 0.9 Ensembl ENCODE 0.8 +2.8 2790 1.3 FOXA2 MAX CEBPG RAD21 YY1 FOS RXRA CEBPB REST PPARG GC07P027363 LOC105375207 LOC105375206
GH07I027346 Enhancer 1.4 UCNEbase Ensembl ENCODE 0.4 -14.5 -14456 1.8 PKNOX1 FOXA2 NFIB MZF1 FEZF1 RFX5 ZNF335 FOS ZNF362 SMARCC1 TAX1BP1 LOC105375207 HNRNPA1P73
GH07I027372 Enhancer 0.7 ENCODE 0.4 +10.7 10684 0.2 SIX4 CTCF MZF1 RAD21 ZNF335 PATZ1 PRDM10 FOSL2 FOS SMARCE1 GC07P027363 LOC105375206 LOC105375207
GH07I027349 Enhancer 0.6 ENCODE 0.4 -11.8 -11838 0.8 SMARCE1 PKNOX1 MAZ DPF2 FOXA1 CTBP1 GATA3 CUX1 FOS EVX1-AS ENSG00000253308 EVX1 TAX1BP1 LOC105375207 HNRNPA1P73
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375207 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375207 Gene

Genomic Locations for LOC105375207 Gene
chr7:27,361,843-27,409,938
(GRCh38/hg38)
Size:
48,096 bases
Orientation:
Plus strand
chr7:27,401,462-27,449,557
(GRCh37/hg19)

Genomic View for LOC105375207 Gene

Genes around LOC105375207 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375207 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375207 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375207 Gene

Proteins for LOC105375207 Gene

Post-translational modifications for LOC105375207 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375207 Gene

Domains & Families for LOC105375207 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375207 Gene

Function for LOC105375207 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375207 Gene

Localization for LOC105375207 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375207 Gene

Pathways & Interactions for LOC105375207 Gene

SuperPathways for LOC105375207 Gene

No Data Available

Interacting Proteins for LOC105375207 Gene

Gene Ontology (GO) - Biological Process for LOC105375207 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375207 Gene

Drugs & Compounds for LOC105375207 Gene

No Compound Related Data Available

Transcripts for LOC105375207 Gene

mRNA/cDNA for LOC105375207 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375207 Gene

No ASD Table

Relevant External Links for LOC105375207 Gene

GeneLoc Exon Structure for
LOC105375207

Expression for LOC105375207 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375207 Gene

Orthologs for LOC105375207 Gene

Evolution for LOC105375207 Gene

ENSEMBL:
Gene Tree for LOC105375207 (if available)
TreeFam:
Gene Tree for LOC105375207 (if available)

No data available for Orthologs for LOC105375207 Gene

Paralogs for LOC105375207 Gene

No data available for Paralogs for LOC105375207 Gene

Variants for LOC105375207 Gene

Sequence variations from dbSNP and Humsavar for LOC105375207 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000157867 -- 27,391,003(+) A/G intron_variant
rs1000182918 -- 27,402,562(+) G/A intron_variant
rs1000346749 -- 27,403,891(+) A/G intron_variant
rs1000391739 -- 27,409,825(+) A/G intron_variant, non_coding_transcript_variant
rs1000515973 -- 27,386,021(+) A/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375207 Gene

Disorders for LOC105375207 Gene

No disorders were found for LOC105375207 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375207 Gene

Publications for LOC105375207 Gene

No publications were found for LOC105375207 Gene.

Products for LOC105375207 Gene

Sources for LOC105375207 Gene

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