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Aliases for LOC105375198 Gene

Subcategory (RNA class) for LOC105375198 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375198 Gene

  • Uncharacterized LOC105375198 3

External Ids for LOC105375198 Gene

Previous GeneCards Identifiers for LOC105375198 Gene

  • GC07U903956

Summaries for LOC105375198 Gene

GeneCards Summary for LOC105375198 Gene

LOC105375198 (Uncharacterized LOC105375198) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375198 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375198 Gene

Genomics for LOC105375198 Gene

GeneHancer (GH) Regulatory Elements for LOC105375198 Gene

Promoters and enhancers for LOC105375198 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J026099 Enhancer 1.2 FANTOM5 Ensembl ENCODE 650.7 +0.2 198 4.7 ELF3 ZFP64 MAX TEAD3 POLR2A ZSCAN5C NR2F6 EZH2 ZBTB20 ZNF687 LOC105375198 SNX10 HNRNPA2B1 LOC105375199
GH07J026096 Enhancer 1 Ensembl ENCODE 0.7 -4.1 -4119 1.5 EGR1 ATF7 IKZF2 EGR2 CEBPB ZNF398 ELF1 ZEB2 ZNF518A ZFP69B NFE2L3 CBX3 HNRNPA2B1 LOC105375198 GC07P026071 LOC105375199
GH07J026090 Enhancer 0.9 Ensembl ENCODE 0.4 -10.6 -10602 0.9 CTCF PAX8 ZNF384 ZIC2 RAD21 CC2D1A ZNF335 ZNF366 ZSCAN5C ZNF143 NFE2L3 HNRNPA2B1 CBX3 LOC105375198 GC07P026071 LOC105375199
GH07J026089 Enhancer 0.8 FANTOM5 ENCODE 0.4 -12.1 -12073 0.9 AFF1 ELF1 CHAMP1 CC2D1A ZNF766 POLR2A GABPB1 IKZF1 PRDM10 TRIM24 HNRNPA2B1 NFE2L3 SNX10 CBX3 LOC105375198 GC07P026071 LOC105375199
GH07J026078 Enhancer 1 Ensembl ENCODE 0.3 -22.5 -22491 0.5 PKNOX1 ATF1 RB1 RAD21 ZNF335 EGR1 ZSCAN5C SCRT2 ZNF143 THAP11 NFE2L3 HNRNPA2B1 CBX3 LOC105375304 GC07P026071 LOC105375198 LOC105375199
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375198 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375198 Gene

Genomic Locations for LOC105375198 Gene
chr7:26,101,638-26,123,242
(GRCh38/hg38)
Size:
21,605 bases
Orientation:
Plus strand

Genomic View for LOC105375198 Gene

Genes around LOC105375198 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375198 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375198 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375198 Gene

Proteins for LOC105375198 Gene

Post-translational modifications for LOC105375198 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375198 Gene

Domains & Families for LOC105375198 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375198 Gene

Function for LOC105375198 Gene

Phenotypes From GWAS Catalog for LOC105375198 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375198 Gene

Localization for LOC105375198 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375198 Gene

Pathways & Interactions for LOC105375198 Gene

SuperPathways for LOC105375198 Gene

No Data Available

Interacting Proteins for LOC105375198 Gene

Gene Ontology (GO) - Biological Process for LOC105375198 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375198 Gene

Drugs & Compounds for LOC105375198 Gene

No Compound Related Data Available

Transcripts for LOC105375198 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375198 Gene

No ASD Table

Relevant External Links for LOC105375198 Gene

GeneLoc Exon Structure for
LOC105375198

No data available for mRNA/cDNA for LOC105375198 Gene

Expression for LOC105375198 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375198 Gene

Orthologs for LOC105375198 Gene

No data available for Orthologs and Evolution for LOC105375198 Gene

Paralogs for LOC105375198 Gene

No data available for Paralogs for LOC105375198 Gene

Variants for LOC105375198 Gene

Sequence variations from dbSNP and Humsavar for LOC105375198 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000186143 -- 26,114,506(+) A/G intron_variant
rs1000275053 -- 26,111,373(+) G/C intron_variant
rs1000285711 -- 26,101,107(+) A/C upstream_transcript_variant
rs1000438469 -- 26,110,617(+) C/G intron_variant
rs1000465627 -- 26,117,853(+) A/T genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375198 Gene

Disorders for LOC105375198 Gene

No disorders were found for LOC105375198 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375198 Gene

Publications for LOC105375198 Gene

No publications were found for LOC105375198 Gene.

Products for LOC105375198 Gene

Sources for LOC105375198 Gene

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