Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105375185 Gene

Subcategory (RNA class) for LOC105375185 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375185 Gene

  • Uncharacterized LOC105375185 3

External Ids for LOC105375185 Gene

Previous GeneCards Identifiers for LOC105375185 Gene

  • GC07U904002

Summaries for LOC105375185 Gene

GeneCards Summary for LOC105375185 Gene

LOC105375185 (Uncharacterized LOC105375185) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375185 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375185 Gene

Genomics for LOC105375185 Gene

GeneHancer (GH) Regulatory Elements for LOC105375185 Gene

Promoters and enhancers for LOC105375185 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J023019 Enhancer 1.2 FANTOM5 Ensembl ENCODE 650.7 +0.8 800 5.5 PKNOX1 TEAD4 JUN MAX E4F1 FOSL1 ZNF316 EGR1 ZNF239 FOS LOC105375185 TOMM7 ENSG00000179428 FAM126A IL6 LOC105375186
GH07J023018 Enhancer 0.7 ENCODE 0.7 -2.8 -2764 0.2 SOX13 JUN FOSL1 CBFA2T2 TRIM24 SOX5 SMARCE1 SOX6 CBFA2T3 DPF2 LOC105375185 FAM126A
GH07J023016 Enhancer 0.7 ENCODE 0.7 -4.9 -4864 0.2 SOX13 RBPJ ZSCAN9 RARA NR2F6 MIXL1 GATAD2A SOX5 TFE3 TEAD1 LOC105375185 FAM126A
GH07J023017 Enhancer 0.6 Ensembl 0.7 -4.3 -4320 0.8 FOXA3 MIER2 RBPJ ZSCAN9 RARA GABPA GABPB1 KDM1A ETV6 NR2F6 FAM126A TOMM7 SNHG26 LOC105375185
GH07J023055 Enhancer 0.9 Ensembl ENCODE 0.3 +34.1 34140 0.3 ELF3 CTCF IRF2 PKNOX1 TEAD4 MAX RAD21 RFX5 TEAD3 SLC30A9 FAM126A IL6 ENSG00000179428 LOC105375185 LOC105375186
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375185 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375185 Gene

Genomic Locations for LOC105375185 Gene
chr7:23,021,721-23,030,374
(GRCh38/hg38)
Size:
8,654 bases
Orientation:
Plus strand

Genomic View for LOC105375185 Gene

Genes around LOC105375185 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375185 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375185 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375185 Gene

Proteins for LOC105375185 Gene

Post-translational modifications for LOC105375185 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375185 Gene

Domains & Families for LOC105375185 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375185 Gene

Function for LOC105375185 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375185 Gene

Localization for LOC105375185 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375185 Gene

Pathways & Interactions for LOC105375185 Gene

SuperPathways for LOC105375185 Gene

No Data Available

Interacting Proteins for LOC105375185 Gene

Gene Ontology (GO) - Biological Process for LOC105375185 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375185 Gene

Drugs & Compounds for LOC105375185 Gene

No Compound Related Data Available

Transcripts for LOC105375185 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375185 Gene

No ASD Table

Relevant External Links for LOC105375185 Gene

GeneLoc Exon Structure for
LOC105375185

No data available for mRNA/cDNA for LOC105375185 Gene

Expression for LOC105375185 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375185 Gene

Orthologs for LOC105375185 Gene

No data available for Orthologs and Evolution for LOC105375185 Gene

Paralogs for LOC105375185 Gene

No data available for Paralogs for LOC105375185 Gene

Variants for LOC105375185 Gene

Sequence variations from dbSNP and Humsavar for LOC105375185 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000068816 -- 23,020,759(+) G/C upstream_transcript_variant
rs1000459210 -- 23,026,243(+) A/C intron_variant
rs1000602044 -- 23,020,383(+) A/G upstream_transcript_variant
rs1000746849 -- 23,026,212(+) G/A intron_variant
rs1001057864 -- 23,020,621(+) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375185 Gene

Disorders for LOC105375185 Gene

No disorders were found for LOC105375185 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375185 Gene

Publications for LOC105375185 Gene

No publications were found for LOC105375185 Gene.

Products for LOC105375185 Gene

Sources for LOC105375185 Gene

Content
Loading form....