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Aliases for LOC105375179 Gene

Subcategory (RNA class) for LOC105375179 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375179 Gene

  • Uncharacterized LOC105375179 3
  • AC007091.1 5

External Ids for LOC105375179 Gene

Previous GeneCards Identifiers for LOC105375179 Gene

  • GC07U904035

Summaries for LOC105375179 Gene

GeneCards Summary for LOC105375179 Gene

LOC105375179 (Uncharacterized LOC105375179) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375179 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375179 Gene

Genomics for LOC105375179 Gene

GeneHancer (GH) Regulatory Elements for LOC105375179 Gene

Promoters and enhancers for LOC105375179 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I019376 Enhancer 0.7 Ensembl ENCODE 0.3 +24.4 24398 2.5 PKNOX1 VEZF1 PRDM10 ZNF384 FOS WT1 LOC105375179 GC07P019514
GH07I019403 Enhancer 0.9 Ensembl ENCODE 0.2 +51.6 51587 2.5 ZNF449 JUN GFI1B CEBPB REST EP300 SP1 JUND PRDM6 POLR2A FERD3L ENSG00000229533 LOC105375179 GC07P019514
GH07I019391 Enhancer 0.3 ENCODE 0.3 +38.9 38903 1.3 FOS LOC105375179 GC07P019514
GH07I019369 Enhancer 0.2 FANTOM5 0.4 +16.2 16245 0.3 ENSG00000229533 FERD3L LOC105375179 GC07P019514
GH07I019413 Enhancer 0.4 UCNEbase 0.2 +60.1 60114 0.4 LOC105375179 GC07P019514
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375179 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375179 Gene

Genomic Locations for LOC105375179 Gene
chr7:19,353,534-19,578,606
(GRCh38/hg38)
Size:
225,073 bases
Orientation:
Plus strand
chr7:19,393,157-19,618,229
(GRCh37/hg19)

Genomic View for LOC105375179 Gene

Genes around LOC105375179 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375179 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375179 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375179 Gene

Proteins for LOC105375179 Gene

Post-translational modifications for LOC105375179 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375179 Gene

Domains & Families for LOC105375179 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375179 Gene

Function for LOC105375179 Gene

Phenotypes From GWAS Catalog for LOC105375179 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375179 Gene

Localization for LOC105375179 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375179 Gene

Pathways & Interactions for LOC105375179 Gene

SuperPathways for LOC105375179 Gene

No Data Available

Interacting Proteins for LOC105375179 Gene

Gene Ontology (GO) - Biological Process for LOC105375179 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375179 Gene

Drugs & Compounds for LOC105375179 Gene

No Compound Related Data Available

Transcripts for LOC105375179 Gene

mRNA/cDNA for LOC105375179 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375179 Gene

No ASD Table

Relevant External Links for LOC105375179 Gene

GeneLoc Exon Structure for
LOC105375179

Expression for LOC105375179 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375179 Gene

Orthologs for LOC105375179 Gene

Evolution for LOC105375179 Gene

ENSEMBL:
Gene Tree for LOC105375179 (if available)
TreeFam:
Gene Tree for LOC105375179 (if available)

No data available for Orthologs for LOC105375179 Gene

Paralogs for LOC105375179 Gene

No data available for Paralogs for LOC105375179 Gene

Variants for LOC105375179 Gene

Sequence variations from dbSNP and Humsavar for LOC105375179 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000011842 -- 19,392,577(+) G/A intron_variant
rs1000061694 -- 19,385,957(+) A/G intron_variant
rs1000136312 -- 19,386,040(+) C/T intron_variant
rs1000279592 -- 19,390,976(+) A/G intron_variant
rs1000329405 -- 19,383,799(+) G/GG intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375179 Gene

Disorders for LOC105375179 Gene

No disorders were found for LOC105375179 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375179 Gene

Publications for LOC105375179 Gene

No publications were found for LOC105375179 Gene.

Products for LOC105375179 Gene

Sources for LOC105375179 Gene

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