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Aliases for LOC105375174 Gene

Subcategory (RNA class) for LOC105375174 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375174 Gene

  • Uncharacterized LOC105375174 3
  • AC003986.2 5

External Ids for LOC105375174 Gene

Previous GeneCards Identifiers for LOC105375174 Gene

  • GC07U903932

Summaries for LOC105375174 Gene

GeneCards Summary for LOC105375174 Gene

LOC105375174 (Uncharacterized LOC105375174) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375174 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375174 Gene

Genomics for LOC105375174 Gene

GeneHancer (GH) Regulatory Elements for LOC105375174 Gene

Promoters and enhancers for LOC105375174 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I019104 Promoter/Enhancer 2.8 VISTA EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.3 -261 16.4 PKNOX1 ZSCAN4 SIN3A ZNF335 GLIS2 SCRT2 RCOR1 EGR2 SP3 ZBTB11 TWIST1 LOC105375174 FERD3L ENSG00000229533 GC07P019115 ENSG00000236536 GC07M019093
GH07I018846 Enhancer 1.3 VISTA UCNEbase ENCODE 5 -265.5 -265496 1.3 JUND GATA3 POLR2A FOXP2 RCOR1 CHD2 LOC105375174 RN7SKP266 LOC105375176 HDAC9
GH07I019100 Enhancer 0.6 ENCODE dbSUPER 0.4 -10.4 -10357 3.2 JUND POLR2A CHD2 ENSG00000229533 FERD3L GC07M019093 LOC105375174 TWIST1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375174 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375174 Gene

Genomic Locations for LOC105375174 Gene
chr7:19,112,474-19,115,880
(GRCh38/hg38)
Size:
3,407 bases
Orientation:
Plus strand
chr7:19,152,097-19,153,894
(GRCh37/hg19)

Genomic View for LOC105375174 Gene

Genes around LOC105375174 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375174 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375174 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375174 Gene

Proteins for LOC105375174 Gene

Post-translational modifications for LOC105375174 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375174 Gene

Domains & Families for LOC105375174 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375174 Gene

Function for LOC105375174 Gene

Phenotypes From GWAS Catalog for LOC105375174 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375174 Gene

Localization for LOC105375174 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375174 Gene

Pathways & Interactions for LOC105375174 Gene

SuperPathways for LOC105375174 Gene

No Data Available

Interacting Proteins for LOC105375174 Gene

Gene Ontology (GO) - Biological Process for LOC105375174 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375174 Gene

Drugs & Compounds for LOC105375174 Gene

No Compound Related Data Available

Transcripts for LOC105375174 Gene

mRNA/cDNA for LOC105375174 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375174 Gene

No ASD Table

Relevant External Links for LOC105375174 Gene

GeneLoc Exon Structure for
LOC105375174

Expression for LOC105375174 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375174 Gene

Orthologs for LOC105375174 Gene

Evolution for LOC105375174 Gene

ENSEMBL:
Gene Tree for LOC105375174 (if available)
TreeFam:
Gene Tree for LOC105375174 (if available)

No data available for Orthologs for LOC105375174 Gene

Paralogs for LOC105375174 Gene

No data available for Paralogs for LOC105375174 Gene

Variants for LOC105375174 Gene

Sequence variations from dbSNP and Humsavar for LOC105375174 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000061202 -- 19,107,336(+) G/A intron_variant
rs1000423397 -- 19,111,152(+) G/A intron_variant
rs1000888985 -- 19,116,283(+) G/A downstream_transcript_variant
rs1001157329 -- 19,112,370(+) G/A non_coding_transcript_variant
rs1001285416 -- 19,106,933(+) G/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375174 Gene

Disorders for LOC105375174 Gene

No disorders were found for LOC105375174 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375174 Gene

Publications for LOC105375174 Gene

No publications were found for LOC105375174 Gene.

Products for LOC105375174 Gene

Sources for LOC105375174 Gene

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