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Aliases for LOC105375172 Gene

Subcategory (RNA class) for LOC105375172 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375172 Gene

  • Uncharacterized LOC105375172 3

External Ids for LOC105375172 Gene

Previous GeneCards Identifiers for LOC105375172 Gene

  • GC07U903985

Summaries for LOC105375172 Gene

GeneCards Summary for LOC105375172 Gene

LOC105375172 (Uncharacterized LOC105375172) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375172 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375172 Gene

Genomics for LOC105375172 Gene

GeneHancer (GH) Regulatory Elements for LOC105375172 Gene

Promoters and enhancers for LOC105375172 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I017463 Enhancer 0.2 Ensembl 550.8 -0.8 -763 0.2 LOC105375172 ENSG00000236318 ENSG00000199473 LOC101927609 KCCAT333 LOC101927630 ENSG00000283321
GH07I017523 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -61.3 -61288 2.1 ELF3 FOXA2 THRB RAD21 RARA ETS1 YY1 ZNF335 RCOR1 MIXL1 LOC101927630 LOC105375172
GH07I017444 Enhancer 0.7 ENCODE 0.4 +18.4 18353 1.2 JUN RAD21 RARA ZNF7 FOSL2 CEBPB MAFG EP300 NR2F2 SP1 ENSG00000236318 ENSG00000199473 LOC101927630 LOC105375172 KCCAT333 ENSG00000283321
GH07I017405 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.2 +55.7 55734 4.1 CLOCK FOXA2 MLX ARID4B SIN3A BRCA1 YY1 ATF7 FOS RXRA ENSG00000199473 ENSG00000236318 LOC101927609 AHR KCCAT333 LOC105375172 ENSG00000283321 LOC101927630
GH07I017506 Enhancer 0.9 ENCODE 0.3 -43.1 -43124 0.1 PKNOX1 FOXA2 MLX ARID4B YY1 ATF7 RUNX3 RXRA SP5 JUNB ENSG00000199473 ENSG00000236318 LOC105375172 LOC101927630
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375172 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375172 Gene

Genomic Locations for LOC105375172 Gene
chr7:17,430,587-17,463,138
(GRCh38/hg38)
Size:
32,552 bases
Orientation:
Minus strand

Genomic View for LOC105375172 Gene

Genes around LOC105375172 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375172 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375172 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375172 Gene

Proteins for LOC105375172 Gene

Post-translational modifications for LOC105375172 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375172 Gene

Domains & Families for LOC105375172 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375172 Gene

Function for LOC105375172 Gene

Phenotypes From GWAS Catalog for LOC105375172 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375172 Gene

Localization for LOC105375172 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375172 Gene

Pathways & Interactions for LOC105375172 Gene

SuperPathways for LOC105375172 Gene

No Data Available

Interacting Proteins for LOC105375172 Gene

Gene Ontology (GO) - Biological Process for LOC105375172 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375172 Gene

Drugs & Compounds for LOC105375172 Gene

No Compound Related Data Available

Transcripts for LOC105375172 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375172 Gene

No ASD Table

Relevant External Links for LOC105375172 Gene

GeneLoc Exon Structure for
LOC105375172

No data available for mRNA/cDNA for LOC105375172 Gene

Expression for LOC105375172 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375172 Gene

Orthologs for LOC105375172 Gene

No data available for Orthologs and Evolution for LOC105375172 Gene

Paralogs for LOC105375172 Gene

No data available for Paralogs for LOC105375172 Gene

Variants for LOC105375172 Gene

Sequence variations from dbSNP and Humsavar for LOC105375172 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000045262 -- 17,447,672(-) C/G intron_variant
rs1000234660 -- 17,455,893(-) C/A/G intron_variant
rs1000244459 -- 17,456,136(-) C/T intron_variant
rs1000402971 -- 17,433,481(-) T/A non_coding_transcript_variant
rs1000410004 -- 17,461,525(-) G/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375172 Gene

Disorders for LOC105375172 Gene

Additional Disease Information for LOC105375172

No disorders were found for LOC105375172 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105375172 Gene

Publications for LOC105375172 Gene

No publications were found for LOC105375172 Gene.

Products for LOC105375172 Gene

Sources for LOC105375172 Gene

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