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Aliases for LOC105375168 Gene

Subcategory (RNA class) for LOC105375168 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375168 Gene

  • Uncharacterized LOC105375168 3
  • AC005014.3 5

External Ids for LOC105375168 Gene

Previous GeneCards Identifiers for LOC105375168 Gene

  • GC07U904186

Summaries for LOC105375168 Gene

GeneCards Summary for LOC105375168 Gene

LOC105375168 (Uncharacterized LOC105375168) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375168 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375168 Gene

Genomics for LOC105375168 Gene

GeneHancer (GH) Regulatory Elements for LOC105375168 Gene

Promoters and enhancers for LOC105375168 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J016419 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11.7 -38.9 -38919 4.3 HDGF FOXA2 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ISPD LOC105375168 GC07M016295 GC07M016323
GH07J016416 Enhancer 0.8 ENCODE 7.8 -43.1 -43074 1.3 HDAC1 PKNOX1 ATF1 ARNT ZBTB40 TCF12 E2F8 FOS ATF7 CREM LOC105375168 GC07M016295 GC07M016323 ISPD
GH07J016402 Enhancer 0.4 ENCODE 7.5 -57.7 -57743 0.9 GATA3 TRIM24 TRIM28 LOC105375168 GC07M016295 GC07M016323 ISPD
GH07J016412 Enhancer 0.2 ENCODE 8.5 -47.3 -47309 1.6 LOC105375168 GC07M016295 GC07M016323 ISPD
GH07J016464 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 0.4 +5.4 5397 2.2 HDAC1 PKNOX1 SMAD1 ATF1 ZNF335 POLR2B ZFP91 ATF7 SMAD5 CEBPB SOSTDC1 LOC105375168 GC07M016477 ISPD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375168 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375168 Gene

Genomic Locations for LOC105375168 Gene
chr7:16,460,200-16,471,809
(GRCh38/hg38)
Size:
11,610 bases
Orientation:
Plus strand
chr7:16,510,809-16,510,998
(GRCh37/hg19)
Size:
190 bases
Orientation:
Plus strand

Genomic View for LOC105375168 Gene

Genes around LOC105375168 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375168 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375168 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375168 Gene

Proteins for LOC105375168 Gene

Post-translational modifications for LOC105375168 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375168 Gene

Domains & Families for LOC105375168 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375168 Gene

Function for LOC105375168 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375168 Gene

Localization for LOC105375168 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375168 Gene

Pathways & Interactions for LOC105375168 Gene

SuperPathways for LOC105375168 Gene

No Data Available

Interacting Proteins for LOC105375168 Gene

Gene Ontology (GO) - Biological Process for LOC105375168 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375168 Gene

Drugs & Compounds for LOC105375168 Gene

No Compound Related Data Available

Transcripts for LOC105375168 Gene

mRNA/cDNA for LOC105375168 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375168 Gene

No ASD Table

Relevant External Links for LOC105375168 Gene

GeneLoc Exon Structure for
LOC105375168

Expression for LOC105375168 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375168 Gene

Orthologs for LOC105375168 Gene

Evolution for LOC105375168 Gene

ENSEMBL:
Gene Tree for LOC105375168 (if available)
TreeFam:
Gene Tree for LOC105375168 (if available)

No data available for Orthologs for LOC105375168 Gene

Paralogs for LOC105375168 Gene

No data available for Paralogs for LOC105375168 Gene

Variants for LOC105375168 Gene

Sequence variations from dbSNP and Humsavar for LOC105375168 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000015750 -- 16,463,983(+) A/C non_coding_transcript_variant
rs1000088697 -- 16,464,194(+) G/A intron_variant
rs1000556251 -- 16,468,167(+) G/C intron_variant
rs1000940345 -- 16,466,940(+) C/A intron_variant
rs1001089128 -- 16,462,862(+) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375168 Gene

Disorders for LOC105375168 Gene

No disorders were found for LOC105375168 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375168 Gene

Publications for LOC105375168 Gene

No publications were found for LOC105375168 Gene.

Products for LOC105375168 Gene

Sources for LOC105375168 Gene

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