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Aliases for LOC105375161 Gene

Subcategory (RNA class) for LOC105375161 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375161 Gene

  • Uncharacterized LOC105375161 3
  • AC011287.1 5

External Ids for LOC105375161 Gene

Previous GeneCards Identifiers for LOC105375161 Gene

  • GC07U904012
  • GC07P013728

Summaries for LOC105375161 Gene

GeneCards Summary for LOC105375161 Gene

LOC105375161 (Uncharacterized LOC105375161) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375161 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375161 Gene

Genomics for LOC105375161 Gene

GeneHancer (GH) Regulatory Elements for LOC105375161 Gene

Promoters and enhancers for LOC105375161 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J012723 Enhancer 0.5 dbSUPER 650.7 -1.9 -1898 0.7 BCOR CAVIN1 ZNF512 ZFP91 ZBTB33 LOC105375161 GC07M012701
GH07J013057 Enhancer 0.9 Ensembl ENCODE 12.1 +331.5 331507 1.2 HDAC1 BCOR PKNOX1 IRF2 LEF1 MCM2 CHAMP1 CC2D1A ATF7 MEF2B LOC105375161 PIR47560 PIR47674 GC07P013103 GC07P013104 GC07P013105 GC07P013106 GC07P013107 GC07P013108 GC07P013109
GH07J013042 Enhancer 0.6 ENCODE 11.9 +316.9 316923 1.4 FOXA2 TEAD1 FOXA3 FOXA1 TEAD3 SP1 JUND FOSL2 FOS FOXP1 LOC105375161 PIR47674 PIR47560 GC07P013103 GC07P013104 GC07P013105 GC07P013106 GC07P013107 GC07P013108 GC07P013109
GH07J013026 Enhancer 0.3 ENCODE 14.1 +301.8 301804 2.5 FOXA2 LOC105375161 PIR47674 GC07P013103 GC07P013104 GC07P013105 GC07P013106 GC07P013107 GC07P013108 GC07P013109 GC07P013110
GH07J013021 Enhancer 0.7 ENCODE 4.7 +295.6 295599 0.2 SOX5 GATAD2A SOX13 FOXA2 TEAD1 FOXA3 HMG20A ZNF644 KAT8 TGIF2 LOC105375161 PIR47674 PIR47560 GC07P013103 GC07P013104 GC07P013105 GC07P013106 GC07P013107 GC07P013108 GC07P013109
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375161 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375161 Gene

Genomic Locations for LOC105375161 Gene
chr7:12,726,152-13,751,920
(GRCh38/hg38)
Size:
1,025,769 bases
Orientation:
Plus strand
chr7:13,141,016-13,743,774
(GRCh37/hg19)
Size:
602,759 bases
Orientation:
Plus strand

Genomic View for LOC105375161 Gene

Genes around LOC105375161 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375161 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375161 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375161 Gene

Proteins for LOC105375161 Gene

Post-translational modifications for LOC105375161 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375161 Gene

Domains & Families for LOC105375161 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375161 Gene

Function for LOC105375161 Gene

Phenotypes From GWAS Catalog for LOC105375161 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375161 Gene

Localization for LOC105375161 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375161 Gene

Pathways & Interactions for LOC105375161 Gene

SuperPathways for LOC105375161 Gene

No Data Available

Interacting Proteins for LOC105375161 Gene

Gene Ontology (GO) - Biological Process for LOC105375161 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375161 Gene

Drugs & Compounds for LOC105375161 Gene

No Compound Related Data Available

Transcripts for LOC105375161 Gene

mRNA/cDNA for LOC105375161 Gene

(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(6) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375161 Gene

No ASD Table

Relevant External Links for LOC105375161 Gene

GeneLoc Exon Structure for
LOC105375161

Expression for LOC105375161 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375161 Gene

Orthologs for LOC105375161 Gene

Evolution for LOC105375161 Gene

ENSEMBL:
Gene Tree for LOC105375161 (if available)
TreeFam:
Gene Tree for LOC105375161 (if available)

No data available for Orthologs for LOC105375161 Gene

Paralogs for LOC105375161 Gene

No data available for Paralogs for LOC105375161 Gene

Variants for LOC105375161 Gene

Sequence variations from dbSNP and Humsavar for LOC105375161 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000082454 -- 13,717,042(+) T/C upstream_transcript_variant
rs1000092924 -- 13,721,522(+) C/T intron_variant
rs1000250955 -- 13,732,408(+) C/T intron_variant
rs1000449849 -- 13,733,426(+) G/C non_coding_transcript_variant
rs1000588445 -- 13,733,669(+) G/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375161 Gene

Disorders for LOC105375161 Gene

No disorders were found for LOC105375161 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375161 Gene

Publications for LOC105375161 Gene

No publications were found for LOC105375161 Gene.

Products for LOC105375161 Gene

Sources for LOC105375161 Gene

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