Aliases for LOC105375131 Gene

Subcategory (RNA class) for LOC105375131 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for LOC105375131 Gene

  • Uncharacterized LOC105375131 3

External Ids for LOC105375131 Gene

Previous GeneCards Identifiers for LOC105375131 Gene

  • GC07U903844

Summaries for LOC105375131 Gene

GeneCards Summary for LOC105375131 Gene

LOC105375131 (Uncharacterized LOC105375131) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105375131 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105375131 Gene

Genomics for LOC105375131 Gene

GeneHancer (GH) Regulatory Elements for LOC105375131 Gene

Promoters and enhancers for LOC105375131 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J004135 Enhancer 0.5 ENCODE 500.7 +0.9 881 1.5 EP300 RFX1 POLR2A CTCF SIN3A RAD21 POU5F1 ZBTB33 ENSG00000283991 LOC105375131 SDK1
GH07J004133 Promoter/Enhancer 1.1 Ensembl ENCODE 0.7 +2.9 2910 2.4 SRSF1 CEBPB USF1 SAP130 MAX RXRA RARA MXI1 HNF4A EGR1 ENSG00000283991 LOC105375131 piR-41306-239 SDK1
GH07J004139 Enhancer 0.4 Ensembl CraniofacialAtlas 0.7 -3.3 -3327 1.4 MNT LOC105375131 hsa-miR-5096-076 SDK1
GH07J004144 Enhancer 0.6 ENCODE CraniofacialAtlas 0.4 -7.5 -7481 2.2 POLR2A RCOR1 SMARCA4 CHD2 GATA2 RAD21 LOC105375131 hsa-miR-5096-076 SDK1
GH07J004131 Enhancer 0.6 Ensembl ENCODE 0.4 +5.9 5873 0.6 TEAD4 CTCF RAD21 ENSG00000283991 LOC105375131 piR-41306-239 SDK1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105375131 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375131 Gene

Genomic Locations for LOC105375131 Gene
chr7:4,126,653-4,137,174
(GRCh38/hg38)
Size:
10,522 bases
Orientation:
Minus strand

Genomic View for LOC105375131 Gene

Genes around LOC105375131 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375131 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375131 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375131 Gene

Proteins for LOC105375131 Gene

Post-translational modifications for LOC105375131 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375131 Gene

Domains & Families for LOC105375131 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105375131 Gene

Function for LOC105375131 Gene

Phenotypes From GWAS Catalog for LOC105375131 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375131 Gene

Localization for LOC105375131 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375131 Gene

Pathways & Interactions for LOC105375131 Gene

PathCards logo

SuperPathways for LOC105375131 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105375131 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105375131 Gene

Drugs & Compounds for LOC105375131 Gene

No Compound Related Data Available

Transcripts for LOC105375131 Gene

mRNA/cDNA for LOC105375131 Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375131 Gene

No ASD Table

Relevant External Links for LOC105375131 Gene

GeneLoc Exon Structure for
LOC105375131

Expression for LOC105375131 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375131 Gene

Orthologs for LOC105375131 Gene

No data available for Orthologs and Evolution for LOC105375131 Gene

Paralogs for LOC105375131 Gene

No data available for Paralogs for LOC105375131 Gene

Variants for LOC105375131 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for LOC105375131 Gene

SNP ID Clinical significance and condition Chr 07 pos Variation AA Info Type
780670 Benign: not provided 4,130,009(-) G/A NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS_VARIANT,FIVE_PRIME_UTR_VARIANT

Additional dbSNP identifiers (rs#s) for LOC105375131 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375131 Gene

Disorders for LOC105375131 Gene

No disorders were found for LOC105375131 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375131 Gene

Publications for LOC105375131 Gene

No publications were found for LOC105375131 Gene.

No data available for Mastermind for LOC105375131 Gene

Products for LOC105375131 Gene

Sources for LOC105375131 Gene