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Aliases for LOC105375130 Gene

Subcategory (RNA class) for LOC105375130 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375130 Gene

  • Uncharacterized LOC105375130 3

External Ids for LOC105375130 Gene

Previous GeneCards Identifiers for LOC105375130 Gene

  • GC07U904371

Summaries for LOC105375130 Gene

GeneCards Summary for LOC105375130 Gene

LOC105375130 (Uncharacterized LOC105375130) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375130 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375130 Gene

Genomics for LOC105375130 Gene

GeneHancer (GH) Regulatory Elements for LOC105375130 Gene

Promoters and enhancers for LOC105375130 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I003100 Enhancer 0.3 dbSUPER 550.8 +0.2 222 0.9 NCOA3 LOC105375130 CARD11 PIR35323
GH07I003090 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.8 7816 6.6 EBF1 BATF ZNF623 SP1 IKZF1 RUNX3 IKZF2 BCLAF1 SPI1 CARD11 LOC101927256 ENSG00000228334 LOC105375130 PIR35323
GH07I003116 Enhancer 0.8 ENCODE dbSUPER 0.4 -16.3 -16302 1.4 MAZ ZNF398 ZNF366 ZNF341 ZNF512 PRDM10 PRDM1 ZBTB17 GC07M003127 LOC105375130
GH07I003120 Enhancer 0.7 ENCODE dbSUPER 0.4 -19.5 -19459 0.7 MITF USF2 NFE2 CEBPG GC07M003127 LOC105375130
GH07I003106 Enhancer 0.6 ENCODE dbSUPER 0.4 -5.1 -5051 0.2 GATA3 RUNX3 CARD11 LOC105375130 GC07M003127
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375130 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375130 Gene

Genomic Locations for LOC105375130 Gene
chr7:3,094,030-3,101,381
(GRCh38/hg38)
Size:
7,352 bases
Orientation:
Minus strand

Genomic View for LOC105375130 Gene

Genes around LOC105375130 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375130 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375130 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375130 Gene

Proteins for LOC105375130 Gene

Post-translational modifications for LOC105375130 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375130 Gene

Domains & Families for LOC105375130 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375130 Gene

Function for LOC105375130 Gene

Phenotypes From GWAS Catalog for LOC105375130 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375130 Gene

Localization for LOC105375130 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375130 Gene

Pathways & Interactions for LOC105375130 Gene

SuperPathways for LOC105375130 Gene

No Data Available

Interacting Proteins for LOC105375130 Gene

Gene Ontology (GO) - Biological Process for LOC105375130 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375130 Gene

Drugs & Compounds for LOC105375130 Gene

No Compound Related Data Available

Transcripts for LOC105375130 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375130 Gene

No ASD Table

Relevant External Links for LOC105375130 Gene

GeneLoc Exon Structure for
LOC105375130

No data available for mRNA/cDNA for LOC105375130 Gene

Expression for LOC105375130 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375130 Gene

Orthologs for LOC105375130 Gene

No data available for Orthologs and Evolution for LOC105375130 Gene

Paralogs for LOC105375130 Gene

No data available for Paralogs for LOC105375130 Gene

Variants for LOC105375130 Gene

Sequence variations from dbSNP and Humsavar for LOC105375130 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000016843 -- 3,109,247(-) G/T genic_upstream_transcript_variant, intron_variant
rs1000095666 -- 3,112,896(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000401091 -- 3,094,362(-) A/T genic_downstream_transcript_variant, non_coding_transcript_variant
rs1000608370 -- 3,109,202(-) AGGAG/AG genic_upstream_transcript_variant, intron_variant
rs1000699689 -- 3,093,533(-) T/C downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375130 Gene

Disorders for LOC105375130 Gene

No disorders were found for LOC105375130 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375130 Gene

Publications for LOC105375130 Gene

No publications were found for LOC105375130 Gene.

Products for LOC105375130 Gene

Sources for LOC105375130 Gene

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