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Aliases for LOC105375127 Gene

Subcategory (RNA class) for LOC105375127 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375127 Gene

  • Uncharacterized LOC105375127 3

External Ids for LOC105375127 Gene

Previous GeneCards Identifiers for LOC105375127 Gene

  • GC07U904375

Summaries for LOC105375127 Gene

GeneCards Summary for LOC105375127 Gene

LOC105375127 (Uncharacterized LOC105375127) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375127 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375127 Gene

Genomics for LOC105375127 Gene

GeneHancer (GH) Regulatory Elements for LOC105375127 Gene

Promoters and enhancers for LOC105375127 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I002113 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.6 617 1.1 JUND FOS LOC105375127 LFNG MRM2 SNX8 GC07P002128 MAD1L1
GH07I002115 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +3.0 3012 2 MAZ FOXA2 SAP130 FOXA3 ZFP64 ZFHX2 POLR2A ZSCAN5C ZBTB33 FOS NUDT1 LFNG MRM2 EIF3B SNX8 LOC105375127 GC07P002128 MAD1L1
GH07I002103 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.4 -5353 10 HDGF PKNOX1 SMAD1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 MRM2 NUDT1 MAD1L1 LFNG SNX8 LOC105375127 GC07P002097
GH07I002098 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 -13.9 -13901 2.6 HDAC1 ARID4B RAD21 ZNF48 ZBTB40 RUNX3 MXD4 REST ELF1 ZNF592 GC07P002097 MRM2 NUDT1 IQCE LOC105375127 MAD1L1
GH07I002102 Enhancer 0.8 ENCODE dbSUPER 0.4 -11.1 -11103 0.2 HDAC1 HDGF ZNF639 MTA2 TSC22D4 YBX1 ZBTB5 NBN CREB1 ZBTB33 GC07P002097 LOC105375127 MAD1L1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375127 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375127 Gene

Genomic Locations for LOC105375127 Gene
chr7:2,113,564-2,117,740
(GRCh38/hg38)
Size:
4,177 bases
Orientation:
Plus strand

Genomic View for LOC105375127 Gene

Genes around LOC105375127 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375127 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375127 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375127 Gene

Proteins for LOC105375127 Gene

Post-translational modifications for LOC105375127 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375127 Gene

Domains & Families for LOC105375127 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375127 Gene

Function for LOC105375127 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375127 Gene

Localization for LOC105375127 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375127 Gene

Pathways & Interactions for LOC105375127 Gene

SuperPathways for LOC105375127 Gene

No Data Available

Interacting Proteins for LOC105375127 Gene

Gene Ontology (GO) - Biological Process for LOC105375127 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375127 Gene

Drugs & Compounds for LOC105375127 Gene

No Compound Related Data Available

Transcripts for LOC105375127 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375127 Gene

No ASD Table

Relevant External Links for LOC105375127 Gene

GeneLoc Exon Structure for
LOC105375127

No data available for mRNA/cDNA for LOC105375127 Gene

Expression for LOC105375127 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375127 Gene

Orthologs for LOC105375127 Gene

No data available for Orthologs and Evolution for LOC105375127 Gene

Paralogs for LOC105375127 Gene

No data available for Paralogs for LOC105375127 Gene

Variants for LOC105375127 Gene

Sequence variations from dbSNP and Humsavar for LOC105375127 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000098551 -- 2,118,103(+) A/C downstream_transcript_variant
rs1000129937 -- 2,115,528(+) A/G intron_variant, non_coding_transcript_variant
rs1000130336 -- 2,113,835(+) T/A intron_variant, non_coding_transcript_variant
rs1000174999 -- 2,109,599(+) T/C upstream_transcript_variant
rs1001391539 -- 2,110,913(+) C/T genic_upstream_transcript_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375127 Gene

Disorders for LOC105375127 Gene

No disorders were found for LOC105375127 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375127 Gene

Publications for LOC105375127 Gene

No publications were found for LOC105375127 Gene.

Products for LOC105375127 Gene

Sources for LOC105375127 Gene

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