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Aliases for LOC105375120 Gene

Subcategory (RNA class) for LOC105375120 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375120 Gene

  • Uncharacterized LOC105375120 3
  • AC091729.1 5

External Ids for LOC105375120 Gene

Previous GeneCards Identifiers for LOC105375120 Gene

  • GC07U904258

Summaries for LOC105375120 Gene

GeneCards Summary for LOC105375120 Gene

LOC105375120 (Uncharacterized LOC105375120) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375120 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375120 Gene

Genomics for LOC105375120 Gene

GeneHancer (GH) Regulatory Elements for LOC105375120 Gene

Promoters and enhancers for LOC105375120 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J001075 Enhancer 0.9 Ensembl ENCODE dbSUPER 668.2 +2.0 1975 1.6 ZNF263 PKNOX1 ZBTB33 NFXL1 ZNF444 FOS LOC105375120 LOC101927021 GPER1 ENSG00000226291 C7orf50
GH07J001073 Enhancer 0.6 Ensembl ENCODE 697.6 -0.1 -86 2.3 SRF KLF1 PRDM4 LOC105375120 LOC101927021 ZFAND2A COX19 GC07P001069 C7orf50
GH07J001022 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 43.7 -47.8 -47776 7.4 HDGF CLOCK FOXA2 SMAD1 MLX ARNT ARID4B SIN3A DMAP1 YBX1 PIR42102 C7orf50 LOC105375120 LOC101927021 CYP2W1 ZFAND2A SUN1 COX19 INTS1 DNAAF5
GH07J001051 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 48 -19.9 -19851 4.8 HDAC1 ZNF335 ZNF121 GLIS2 GATA2 ATF7 CREM EGR2 ZBTB2 CEBPB GPR146 LOC105375120 LOC101927021 ZFAND2A COX19 GPER1 FAM20C ENSG00000257607 GC07P001058 PIR31890
GH07J001043 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 44.4 -29.5 -29512 3 FOXA2 ARNT ARID4B SIN3A YY1 ZNF766 E2F8 ZNF143 SP3 ZHX2 GPR146 LOC105375120 ZFAND2A MIR339 CYP2W1 COX19 LOC101927021 C7orf50 GPER1 PIR31890
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375120 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375120 Gene

Genomic Locations for LOC105375120 Gene
chr7:1,074,248-1,078,875
(GRCh38/hg38)
Size:
4,628 bases
Orientation:
Plus strand
chr7:1,114,086-1,117,672
(GRCh37/hg19)
Size:
3,587 bases
Orientation:
Plus strand

Genomic View for LOC105375120 Gene

Genes around LOC105375120 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375120 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375120 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375120 Gene

Proteins for LOC105375120 Gene

Post-translational modifications for LOC105375120 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375120 Gene

Domains & Families for LOC105375120 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375120 Gene

Function for LOC105375120 Gene

Phenotypes From GWAS Catalog for LOC105375120 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375120 Gene

Localization for LOC105375120 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375120 Gene

Pathways & Interactions for LOC105375120 Gene

SuperPathways for LOC105375120 Gene

No Data Available

Interacting Proteins for LOC105375120 Gene

Gene Ontology (GO) - Biological Process for LOC105375120 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375120 Gene

Drugs & Compounds for LOC105375120 Gene

No Compound Related Data Available

Transcripts for LOC105375120 Gene

mRNA/cDNA for LOC105375120 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375120 Gene

No ASD Table

Relevant External Links for LOC105375120 Gene

GeneLoc Exon Structure for
LOC105375120

Expression for LOC105375120 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375120 Gene

Orthologs for LOC105375120 Gene

Evolution for LOC105375120 Gene

ENSEMBL:
Gene Tree for LOC105375120 (if available)
TreeFam:
Gene Tree for LOC105375120 (if available)

No data available for Orthologs for LOC105375120 Gene

Paralogs for LOC105375120 Gene

No data available for Paralogs for LOC105375120 Gene

Variants for LOC105375120 Gene

Sequence variations from dbSNP and Humsavar for LOC105375120 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000331349 -- 1,077,204(+) G/A intron_variant
rs1000447070 -- 1,075,262(+) T/C intron_variant
rs1000751982 -- 1,082,669(+) A/C downstream_transcript_variant
rs1000883451 -- 1,075,397(+) G/A intron_variant
rs1001846878 -- 1,079,681(+) C/G non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375120 Gene

Disorders for LOC105375120 Gene

No disorders were found for LOC105375120 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375120 Gene

Publications for LOC105375120 Gene

No publications were found for LOC105375120 Gene.

Products for LOC105375120 Gene

Sources for LOC105375120 Gene

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