Aliases for LOC105375118 Gene

Subcategory (RNA class) for LOC105375118 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for LOC105375118 Gene

  • Uncharacterized LOC105375118 3
  • Novel Transcript 5
  • AC188616.1 5

External Ids for LOC105375118 Gene

Previous GeneCards Identifiers for LOC105375118 Gene

  • GC07U904083

Summaries for LOC105375118 Gene

GeneCards Summary for LOC105375118 Gene

LOC105375118 (Uncharacterized LOC105375118) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105375118 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105375118 Gene

Genomics for LOC105375118 Gene

GeneHancer (GH) Regulatory Elements for LOC105375118 Gene

Promoters and enhancers for LOC105375118 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J000332 Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 500.7 +0.1 129 2.2 ZNF217 CTCF MYC USF1 NCOR1 ZIC2 ZBTB10 TCF7 ZNF423 GABPA LOC105375118 HRAT92 PDGFA PRKAR1B HSALNG0055514
GH07J000340 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -9.1 -9145 4 TCF7 HES1 TGIF2 ZBTB7A SKI ATF2 FOXA2 MYC SRSF1 CREB1 HRAT92 PDGFA FJ601678-065 LOC105375118
GH07J000318 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +12.8 12843 4.5 CTCF ZNF639 ZIC2 KDM6A TCF7 ZNF423 GABPA REST RAD21 CTBP1 HSALNG0055514 LOC105375118
GH07J000326 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +6.1 6076 2.3 RBM25 FOXA2 NR2F2 NFIC KLF8 JUND GATA3 ZNF189 KLF17 HLTF LOC105375118 HSALNG0055514
GH07J000329 Enhancer 0.5 Ensembl ENCODE dbSUPER 0.7 +3.2 3233 2.4 HRAT92 PDGFA LOC105375118 HSALNG0055514
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105375118 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375118 Gene

Genomic Locations for LOC105375118 Gene
chr7:329,776-333,249
(GRCh38/hg38)
Size:
3,474 bases
Orientation:
Minus strand

Genomic View for LOC105375118 Gene

Genes around LOC105375118 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375118 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375118 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375118 Gene

Proteins for LOC105375118 Gene

Post-translational modifications for LOC105375118 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375118 Gene

Domains & Families for LOC105375118 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105375118 Gene

Function for LOC105375118 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375118 Gene

Localization for LOC105375118 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375118 Gene

Pathways & Interactions for LOC105375118 Gene

PathCards logo

SuperPathways for LOC105375118 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105375118 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105375118 Gene

Drugs & Compounds for LOC105375118 Gene

No Compound Related Data Available

Transcripts for LOC105375118 Gene

mRNA/cDNA for LOC105375118 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375118 Gene

No ASD Table

Relevant External Links for LOC105375118 Gene

GeneLoc Exon Structure for
LOC105375118

Expression for LOC105375118 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375118 Gene

Orthologs for LOC105375118 Gene

Evolution for LOC105375118 Gene

ENSEMBL:
Gene Tree for LOC105375118 (if available)
TreeFam:
Gene Tree for LOC105375118 (if available)

No data available for Orthologs for LOC105375118 Gene

Paralogs for LOC105375118 Gene

No data available for Paralogs for LOC105375118 Gene

Variants for LOC105375118 Gene

Additional dbSNP identifiers (rs#s) for LOC105375118 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375118 Gene

Disorders for LOC105375118 Gene

No disorders were found for LOC105375118 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375118 Gene

Publications for LOC105375118 Gene

No publications were found for LOC105375118 Gene.

No data available for Mastermind for LOC105375118 Gene

Products for LOC105375118 Gene

Sources for LOC105375118 Gene