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Aliases for LOC105375100 Gene

Subcategory (RNA class) for LOC105375100 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375100 Gene

  • Uncharacterized LOC105375100 3

External Ids for LOC105375100 Gene

Previous GeneCards Identifiers for LOC105375100 Gene

  • GC06U903029

Summaries for LOC105375100 Gene

GeneCards Summary for LOC105375100 Gene

LOC105375100 (Uncharacterized LOC105375100) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375100 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375100 Gene

Genomics for LOC105375100 Gene

GeneHancer (GH) Regulatory Elements for LOC105375100 Gene

Promoters and enhancers for LOC105375100 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J056040 Enhancer 0.7 FANTOM5 ENCODE 0.3 +28.1 28083 1.4 JUND GATA3 CREB1 CEBPB FOS EP300 LOC105375100 GC06M056228
GH06J056025 Enhancer 0.5 Ensembl 0.4 +12.3 12293 0.2 ZNF217 GATA3 JUN FOXA1 LOC105375100 GC06M056228
GH06J056090 Enhancer 1 Ensembl ENCODE 0.2 +78.7 78704 1.6 ELF3 FOXA2 ARID4B DMAP1 RARA SLC30A9 ZNF335 ZNF366 ATF7 CREM COL21A1 LOC105375100 GC06M056228
GH06J056046 Enhancer 0.6 Ensembl ENCODE 0.3 +34.0 34009 0.8 RFX1 SCRT2 KIAA1586 LOC105375100 GC06M056228
GH06J056100 Enhancer 0.8 Ensembl ENCODE 0.2 +88.4 88412 0.9 JUN MAX CEBPB DPF2 EP300 SP1 ZNF217 JUND GATA3 POLR2A COL21A1 LOC105375100 GC06M056228
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375100 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375100 Gene

Genomic Locations for LOC105375100 Gene
chr6:56,012,808-56,019,173
(GRCh38/hg38)
Size:
6,366 bases
Orientation:
Plus strand

Genomic View for LOC105375100 Gene

Genes around LOC105375100 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375100 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375100 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375100 Gene

Proteins for LOC105375100 Gene

Post-translational modifications for LOC105375100 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375100 Gene

Domains & Families for LOC105375100 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375100 Gene

Function for LOC105375100 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375100 Gene

Localization for LOC105375100 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375100 Gene

Pathways & Interactions for LOC105375100 Gene

SuperPathways for LOC105375100 Gene

No Data Available

Interacting Proteins for LOC105375100 Gene

Gene Ontology (GO) - Biological Process for LOC105375100 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375100 Gene

Drugs & Compounds for LOC105375100 Gene

No Compound Related Data Available

Transcripts for LOC105375100 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375100 Gene

No ASD Table

Relevant External Links for LOC105375100 Gene

GeneLoc Exon Structure for
LOC105375100

No data available for mRNA/cDNA for LOC105375100 Gene

Expression for LOC105375100 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375100 Gene

Orthologs for LOC105375100 Gene

No data available for Orthologs and Evolution for LOC105375100 Gene

Paralogs for LOC105375100 Gene

No data available for Paralogs for LOC105375100 Gene

Variants for LOC105375100 Gene

Sequence variations from dbSNP and Humsavar for LOC105375100 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000307196 -- 56,015,860(+) A/T intron_variant
rs1000933756 -- 56,018,884(+) C/T intron_variant
rs1001005010 -- 56,014,064(+) G/A/T intron_variant
rs1001281294 -- 56,019,109(+) A/G non_coding_transcript_variant
rs1002010865 -- 56,014,942(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375100 Gene

Disorders for LOC105375100 Gene

No disorders were found for LOC105375100 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375100 Gene

Publications for LOC105375100 Gene

No publications were found for LOC105375100 Gene.

Products for LOC105375100 Gene

Sources for LOC105375100 Gene

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