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Aliases for LOC105375095 Gene

Subcategory (RNA class) for LOC105375095 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375095 Gene

  • Uncharacterized LOC105375095 3
  • AL033397.2 5

External Ids for LOC105375095 Gene

Previous GeneCards Identifiers for LOC105375095 Gene

  • GC06U902919

Summaries for LOC105375095 Gene

GeneCards Summary for LOC105375095 Gene

LOC105375095 (Uncharacterized LOC105375095) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375095 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375095 Gene

Genomics for LOC105375095 Gene

GeneHancer (GH) Regulatory Elements for LOC105375095 Gene

Promoters and enhancers for LOC105375095 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I052881 Enhancer 1.1 Ensembl ENCODE 11 -591.6 -591645 1.3 ELF3 RB1 ARID4B KLF17 DMAP1 ZNF2 RAD21 YY1 ZNF335 ZNF143 LOC105375091 EFHC1 LOC105375095 MCM3 GSTA10P
GH06I053685 Enhancer 0.8 dbSUPER 10.4 +212.8 212788 2.3 FOXA2 ZNF493 ZNF529 ZFP64 ZNF213 ZNF354C ZNF138 ZNF366 ZNF202 ZNF680 LOC105375095 GSTA4 KLHL31 ENSG00000227885
GH06I053494 Enhancer 0.6 ENCODE 6.8 +22.4 22399 3 HLF MAFG CEBPB SP1 MAFF JUND ZNF316 ZNF692 HMBOX1 FOSL2 GC06M053483 KLHL31 LOC105375095 GCLC GC06P053483
GH06I053511 Enhancer 0.9 ENCODE dbSUPER 4.5 +39.6 39554 3.4 CTCF FOXA2 TAF1 MAX ZNF644 RAD21 YY1 TEAD3 HNF4G MIXL1 GCLC LINC01564 LOC105375095 GC06M053483 GC06P053583
GH06I053483 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 +9.7 9735 1.3 HDAC1 ATF1 ZBTB40 TCF12 SCRT2 RCOR1 ETV6 ATF7 CREM NFYC GC06P053483 LOC105375095 GC06M053483
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375095 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375095 Gene

Genomic Locations for LOC105375095 Gene
chr6:53,474,102-53,506,919
(GRCh38/hg38)
Size:
32,818 bases
Orientation:
Plus strand
chr6:53,367,983-53,371,717
(GRCh37/hg19)

Genomic View for LOC105375095 Gene

Genes around LOC105375095 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375095 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375095 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375095 Gene

Proteins for LOC105375095 Gene

Post-translational modifications for LOC105375095 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375095 Gene

Domains & Families for LOC105375095 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375095 Gene

Function for LOC105375095 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375095 Gene

Localization for LOC105375095 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375095 Gene

Pathways & Interactions for LOC105375095 Gene

SuperPathways for LOC105375095 Gene

No Data Available

Interacting Proteins for LOC105375095 Gene

Gene Ontology (GO) - Biological Process for LOC105375095 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375095 Gene

Drugs & Compounds for LOC105375095 Gene

No Compound Related Data Available

Transcripts for LOC105375095 Gene

mRNA/cDNA for LOC105375095 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375095 Gene

No ASD Table

Relevant External Links for LOC105375095 Gene

GeneLoc Exon Structure for
LOC105375095

Expression for LOC105375095 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375095 Gene

Orthologs for LOC105375095 Gene

Evolution for LOC105375095 Gene

ENSEMBL:
Gene Tree for LOC105375095 (if available)
TreeFam:
Gene Tree for LOC105375095 (if available)

No data available for Orthologs for LOC105375095 Gene

Paralogs for LOC105375095 Gene

No data available for Paralogs for LOC105375095 Gene

Variants for LOC105375095 Gene

Sequence variations from dbSNP and Humsavar for LOC105375095 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs121907946 pathogenic, Gamma-glutamylcysteine synthetase deficiency, hemolytic anemia due to 53,507,001(+) T/A/C downstream_transcript_variant
rs1000005683 -- 53,504,152(+) C/T intron_variant
rs1000955359 -- 53,506,366(+) A/T non_coding_transcript_variant
rs1001004737 -- 53,506,020(+) C/T intron_variant
rs1002046596 -- 53,505,546(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375095 Gene

Disorders for LOC105375095 Gene

No disorders were found for LOC105375095 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375095 Gene

Publications for LOC105375095 Gene

No publications were found for LOC105375095 Gene.

Products for LOC105375095 Gene

Sources for LOC105375095 Gene

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