LOC105375085 Gene (RNA Gene)

Uncharacterized LOC105375085

GC06M051398
GIFtS:
1
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Aliases for LOC105375085 Gene

Subcategory (RNA class) for LOC105375085 Gene

ncRNA

Aliases for LOC105375085 Gene

  • Uncharacterized LOC105375085 3

External Ids for LOC105375085 Gene

Previous GeneCards Identifiers for LOC105375085 Gene

  • GC06U903081

Summaries for LOC105375085 Gene

GeneCards Summary for LOC105375085 Gene

LOC105375085 (Uncharacterized LOC105375085) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375085 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105375085 Gene

Genomics for LOC105375085 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105375085 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J051409 Enhancer 0.3 UCNEbase 600.7 -1.4 -1440 0.3 ENSG00000232702 LOC105375085 LOC646517 lnc-PKHD1-2 PKHD1 TFAP2B
GH06J051398 Enhancer 0.5 Ensembl 0.4 +10.0 9978 0.2 CTCF NFIC JUNB BATF ZNF687 LOC105375085 lnc-PKHD1-3 TFAP2B PKHD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105375085 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105375085 Gene

Genomic Locations for LOC105375085 Gene
chr6:51,398,321-51,408,679
(GRCh38/hg38)
Size:
10,359 bases
Orientation:
Minus strand

Genomic View for LOC105375085 Gene

Genes around LOC105375085 on UCSC Golden Path with GeneCards custom track
LOC105375085 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105375085 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375085 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105375085 Gene

Proteins for LOC105375085 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105375085 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375085 Gene

Domains & Families for LOC105375085 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105375085 Gene

Function for LOC105375085 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375085 Gene

Localization for LOC105375085 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375085 Gene

Pathways & Interactions for LOC105375085 Gene

PathCards logo

SuperPathways for LOC105375085 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105375085 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105375085 Gene

Drugs & Compounds for LOC105375085 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105375085 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
LOC105375085 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375085 Gene

No ASD Table

Relevant External Links for LOC105375085 Gene

GeneLoc Exon Structure for
LOC105375085

No data available for mRNA/cDNA for LOC105375085 Gene

Expression for LOC105375085 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375085 Gene

Orthologs for LOC105375085 Gene

No data available for Orthologs and Evolution for LOC105375085 Gene

Paralogs for LOC105375085 Gene

No data available for Paralogs for LOC105375085 Gene

Variants for LOC105375085 Gene

Additional dbSNP identifiers (rs#s) for LOC105375085 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375085 Gene

Disorders for LOC105375085 Gene

No disorders were found for LOC105375085 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375085 Gene

Publications for LOC105375085 Gene

No publications were found for LOC105375085 Gene.

No data available for Mastermind for LOC105375085 Gene

Products for LOC105375085 Gene

Sources for LOC105375085 Gene