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Aliases for LOC105375078 Gene

Subcategory (RNA class) for LOC105375078 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375078 Gene

  • Uncharacterized LOC105375078 3

External Ids for LOC105375078 Gene

Previous GeneCards Identifiers for LOC105375078 Gene

  • GC06U903146

Summaries for LOC105375078 Gene

GeneCards Summary for LOC105375078 Gene

LOC105375078 (Uncharacterized LOC105375078) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375078 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375078 Gene

Genomics for LOC105375078 Gene

GeneHancer (GH) Regulatory Elements for LOC105375078 Gene

Promoters and enhancers for LOC105375078 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I045930 Enhancer 0.9 ENCODE dbSUPER 0.4 +18.6 18642 0.1 CTCF TFAP4 MAX MZF1 RAD21 TEAD3 SMC3 ZNF143 ZNF444 MIXL1 RNU6-754P CLIC5 LOC105375078 GC06M045521
GH06I045923 Enhancer 0.8 ENCODE 0.4 +11.1 11062 0 CTCF FOXA2 RB1 RAD21 CC2D1A ZFHX2 ZNF316 ZNF366 ZBTB48 ZNF143 CLIC5 CYP39A1 LOC105375078 GC06M045521
GH06I045922 Enhancer 0.8 Ensembl 0.4 +10.9 10934 0.2 FOXA2 RB1 RAD21 ZNF366 ZNF143 RUNX3 EGR2 ZNF654 RXRA REST CLIC5 CYP39A1 LOC105375078 GC06M045521
GH06I045879 Enhancer 0.9 VISTA ENCODE 0.3 -30.8 -30776 3.3 RFX1 MNT ZIC2 ZNF7 TEAD3 LOC105375078 GC06M045521 GC06P045772
GH06I045951 Enhancer 0.7 ENCODE dbSUPER 0.3 +40.0 40032 1.6 FOXA2 KLF17 CREB1 ATF7 ATF2 WT1 FOXA1 CLIC5 GC06M045521 LOC105375078
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375078 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375078 Gene

Genomic Locations for LOC105375078 Gene
chr6:45,911,967-45,930,080
(GRCh38/hg38)
Size:
18,114 bases
Orientation:
Plus strand

Genomic View for LOC105375078 Gene

Genes around LOC105375078 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375078 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375078 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375078 Gene

Proteins for LOC105375078 Gene

Post-translational modifications for LOC105375078 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375078 Gene

Domains & Families for LOC105375078 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375078 Gene

Function for LOC105375078 Gene

Phenotypes From GWAS Catalog for LOC105375078 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375078 Gene

Localization for LOC105375078 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375078 Gene

Pathways & Interactions for LOC105375078 Gene

SuperPathways for LOC105375078 Gene

No Data Available

Interacting Proteins for LOC105375078 Gene

Gene Ontology (GO) - Biological Process for LOC105375078 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375078 Gene

Drugs & Compounds for LOC105375078 Gene

No Compound Related Data Available

Transcripts for LOC105375078 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375078 Gene

No ASD Table

Relevant External Links for LOC105375078 Gene

GeneLoc Exon Structure for
LOC105375078

No data available for mRNA/cDNA for LOC105375078 Gene

Expression for LOC105375078 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375078 Gene

Orthologs for LOC105375078 Gene

No data available for Orthologs and Evolution for LOC105375078 Gene

Paralogs for LOC105375078 Gene

No data available for Paralogs for LOC105375078 Gene

Variants for LOC105375078 Gene

Sequence variations from dbSNP and Humsavar for LOC105375078 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000076822 -- 45,924,216(+) A/T intron_variant
rs1000241175 -- 45,916,189(+) G/A intron_variant
rs1000273892 -- 45,925,605(+) G/A/T intron_variant
rs1000385447 -- 45,930,966(+) C/T intron_variant
rs1000432818 -- 45,921,449(+) G/A/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375078 Gene

Disorders for LOC105375078 Gene

No disorders were found for LOC105375078 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375078 Gene

Publications for LOC105375078 Gene

No publications were found for LOC105375078 Gene.

Products for LOC105375078 Gene

Sources for LOC105375078 Gene

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