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Aliases for LOC105375070 Gene

Subcategory (RNA class) for LOC105375070 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375070 Gene

  • Uncharacterized LOC105375070 3
  • AL157371.2 5

External Ids for LOC105375070 Gene

Previous GeneCards Identifiers for LOC105375070 Gene

  • GC06U903020

Summaries for LOC105375070 Gene

GeneCards Summary for LOC105375070 Gene

LOC105375070 (Uncharacterized LOC105375070) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375070 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375070 Gene

Genomics for LOC105375070 Gene

GeneHancer (GH) Regulatory Elements for LOC105375070 Gene

Promoters and enhancers for LOC105375070 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J043798 Enhancer 0.5 ENCODE dbSUPER 650.7 0.0 -22 0.2 GABPA LOC105375070 VEGFA GC06P043770 GC06P043362
GH06J043797 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.2 2200 3 HDGF PKNOX1 SMAD1 MLX ARNT ARID4B POLR2B FOS SP3 SP5 ZNF318 XPO5 ABCC10 POLR1C NFKBIE MAD2L1BP LOC105375070 LOC105375069 GC06P043362
GH06J043801 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.2 8212 6.9 HDGF PKNOX1 CLOCK FOXA2 MLX ZFP64 ARID4B DMAP1 YY1 SLC30A9 VEGFA ABCC10 NFKBIE TJAP1 MAD2L1BP LOC105375070 LOC105375069 GC06P043362
GH06J043765 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 -25.7 -25719 11.5 MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF143 ZNF263 SP3 MEF2D GTPBP2 VEGFA ENSG00000272114 GC06P043771 GC06P043770 POLH ZNF318 RPS2P29 RRP36 XPO5
GH06J043810 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +15.5 15473 5.8 HDGF PKNOX1 ATF1 FOXA2 FEZF1 ZNF2 ZNF121 GLIS2 ZNF548 ATF7 ZNF318 GTPBP2 POLH ABCC10 RPS2P29 RRP36 RPL34P14 POLR1C PTK7 VEGFA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375070 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375070 Gene

Genomic Locations for LOC105375070 Gene
chr6:43,797,121-43,842,625
(GRCh38/hg38)
Size:
45,505 bases
Orientation:
Plus strand

Genomic View for LOC105375070 Gene

Genes around LOC105375070 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375070 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375070 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375070 Gene

Proteins for LOC105375070 Gene

Post-translational modifications for LOC105375070 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375070 Gene

Domains & Families for LOC105375070 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375070 Gene

Function for LOC105375070 Gene

Phenotypes From GWAS Catalog for LOC105375070 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375070 Gene

Localization for LOC105375070 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375070 Gene

Pathways & Interactions for LOC105375070 Gene

SuperPathways for LOC105375070 Gene

No Data Available

Interacting Proteins for LOC105375070 Gene

Gene Ontology (GO) - Biological Process for LOC105375070 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375070 Gene

Drugs & Compounds for LOC105375070 Gene

No Compound Related Data Available

Transcripts for LOC105375070 Gene

mRNA/cDNA for LOC105375070 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375070 Gene

No ASD Table

Relevant External Links for LOC105375070 Gene

GeneLoc Exon Structure for
LOC105375070

Expression for LOC105375070 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375070 Gene

Orthologs for LOC105375070 Gene

Evolution for LOC105375070 Gene

ENSEMBL:
Gene Tree for LOC105375070 (if available)
TreeFam:
Gene Tree for LOC105375070 (if available)

No data available for Orthologs for LOC105375070 Gene

Paralogs for LOC105375070 Gene

No data available for Paralogs for LOC105375070 Gene

Variants for LOC105375070 Gene

Sequence variations from dbSNP and Humsavar for LOC105375070 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000133021 -- 43,806,852(+) CCCCCC/CCCCC intron_variant
rs1000310487 -- 43,817,725(+) C/T intron_variant
rs1000407276 -- 43,806,582(+) G/T intron_variant
rs1000575330 -- 43,821,996(+) A/C downstream_transcript_variant
rs1000621876 -- 43,802,435(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375070 Gene

Disorders for LOC105375070 Gene

No disorders were found for LOC105375070 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375070 Gene

Publications for LOC105375070 Gene

No publications were found for LOC105375070 Gene.

Products for LOC105375070 Gene

Sources for LOC105375070 Gene

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