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Aliases for LOC105375069 Gene

Subcategory (RNA class) for LOC105375069 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375069 Gene

  • Uncharacterized LOC105375069 3

External Ids for LOC105375069 Gene

Previous GeneCards Identifiers for LOC105375069 Gene

  • GC06U902772

Summaries for LOC105375069 Gene

GeneCards Summary for LOC105375069 Gene

LOC105375069 (Uncharacterized LOC105375069) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375069 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375069 Gene

Genomics for LOC105375069 Gene

GeneHancer (GH) Regulatory Elements for LOC105375069 Gene

Promoters and enhancers for LOC105375069 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I043838 Enhancer 1.3 Ensembl ENCODE dbSUPER 550.8 -0.3 -284 1.6 HDGF SMAD1 ZNF48 GLIS2 ZNF143 FOS RUNX3 RXRA NCOA1 REST LOC105375069 VEGFA ENSG00000223469 LOC105375070 GC06P043362
GH06I043839 Enhancer 0.5 ENCODE dbSUPER 550.8 -1.9 -1884 1.5 PYGO2 LOC105375069 VEGFA ENSG00000223469 LOC105375070 GC06P043362
GH06I043836 Enhancer 1.1 FANTOM5 dbSUPER 0.8 +2.1 2133 0.1 PKNOX1 ATF1 ARNT TCF12 ZNF766 ATF7 NCOA1 MBD2 MEF2D ZNF184 CAPN11 TCTE1 VEGFA ABCC10 RSPH9 LRRC73 MAD2L1BP LOC105375069 LOC105375070 GC06P043362
GH06I043842 Enhancer 1.1 ENCODE dbSUPER 0.8 -4.3 -4298 1.4 PKNOX1 ATF1 ARNT TCF12 ATF7 ZNF592 MEF2D ATF4 GMEB1 SMARCA4 VEGFA ABCC10 LOC105375069 ENSG00000223469 LOC105375070 GC06P043362
GH06I043832 Enhancer 0.9 ENCODE dbSUPER 0.8 +4.9 4924 2.5 MEIS2 TFAP4 MXI1 PKNOX1 SAP130 ZNF449 RAD21 DNMT3B FOSL1 ZNF316 VEGFA LOC105375069 LOC105375070 GC06P043362
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375069 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375069 Gene

Genomic Locations for LOC105375069 Gene
chr6:43,836,932-43,838,732
(GRCh38/hg38)
Size:
1,801 bases
Orientation:
Minus strand

Genomic View for LOC105375069 Gene

Genes around LOC105375069 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375069 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375069 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375069 Gene

Proteins for LOC105375069 Gene

Post-translational modifications for LOC105375069 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375069 Gene

Domains & Families for LOC105375069 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375069 Gene

Function for LOC105375069 Gene

Phenotypes From GWAS Catalog for LOC105375069 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375069 Gene

Localization for LOC105375069 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375069 Gene

Pathways & Interactions for LOC105375069 Gene

SuperPathways for LOC105375069 Gene

No Data Available

Interacting Proteins for LOC105375069 Gene

Gene Ontology (GO) - Biological Process for LOC105375069 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375069 Gene

Drugs & Compounds for LOC105375069 Gene

No Compound Related Data Available

Transcripts for LOC105375069 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375069 Gene

No ASD Table

Relevant External Links for LOC105375069 Gene

GeneLoc Exon Structure for
LOC105375069

No data available for mRNA/cDNA for LOC105375069 Gene

Expression for LOC105375069 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375069 Gene

Orthologs for LOC105375069 Gene

No data available for Orthologs and Evolution for LOC105375069 Gene

Paralogs for LOC105375069 Gene

No data available for Paralogs for LOC105375069 Gene

Variants for LOC105375069 Gene

Sequence variations from dbSNP and Humsavar for LOC105375069 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000226491 -- 43,840,576(-) G/T upstream_transcript_variant
rs1000883129 -- 43,838,516(-) G/C intron_variant
rs1003577080 -- 43,837,559(-) GT/GTGT intron_variant
rs1003608131 -- 43,837,855(-) T/C intron_variant
rs1003824047 -- 43,840,417(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375069 Gene

Disorders for LOC105375069 Gene

No disorders were found for LOC105375069 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375069 Gene

Publications for LOC105375069 Gene

No publications were found for LOC105375069 Gene.

Products for LOC105375069 Gene

Sources for LOC105375069 Gene

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