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Aliases for LOC105375065 Gene

Subcategory (RNA class) for LOC105375065 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375065 Gene

  • Uncharacterized LOC105375065 3

External Ids for LOC105375065 Gene

Previous GeneCards Identifiers for LOC105375065 Gene

  • GC06U903287

Summaries for LOC105375065 Gene

GeneCards Summary for LOC105375065 Gene

LOC105375065 (Uncharacterized LOC105375065) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375065 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375065 Gene

Genomics for LOC105375065 Gene

GeneHancer (GH) Regulatory Elements for LOC105375065 Gene

Promoters and enhancers for LOC105375065 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J043390 Enhancer 1.3 Ensembl ENCODE dbSUPER 650.7 +1.1 1117 3.5 HDGF PKNOX1 ARNT TCF12 ZNF766 GATA2 ZFP91 NCOA1 MCM5 ZNF592 LOC105375065 GTPBP2 POLH ABCC10 RPL12P47 CRIP3 UBR2 DLK2 TTBK1 DNPH1
GH06J043386 Enhancer 0.7 ENCODE dbSUPER 0.7 -4.7 -4667 0.2 CTCF PKNOX1 ZNF143 SMC3 RAD21 ZNF592 ABCC10 RPL12P47 CRIP3 DLK2 TTBK1 DNPH1 POLR1C YIPF3 LRRC73 SLC22A7
GH06J043382 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -7.5 -7477 2.7 PKNOX1 SMAD1 STAT5A BMI1 YBX1 BATF KLF5 IRF4 YY1 ATF7 GC06P043382 SLC22A7 ABCC10 RPL12P47 CRIP3 DLK2 TTBK1 DNPH1 RNU6-1113P TJAP1
GH06J043398 Enhancer 0.6 ENCODE 0.4 +6.9 6853 0.1 CTCF ZNF654 REST RAD21 FOSL1 JUND FOS PRDM10 LOC105375065 GC06P043418 GC06P043362
GH06J043421 Enhancer 0.6 ENCODE 0.3 +30.8 30761 1.4 ZNF680 ZBTB11 ZFP64 ZNF140 ZC3H11A REST ZNF623 ZNF781 ZNF518A ZNF697 ZNF318 POLR1C CUL7 ABCC10 RPS2P29 POLH XPO5 GTPBP2 ENSG00000272223 RPL34P14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375065 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375065 Gene

Genomic Locations for LOC105375065 Gene
chr6:43,391,335-43,424,729
(GRCh38/hg38)
Size:
33,395 bases
Orientation:
Plus strand

Genomic View for LOC105375065 Gene

Genes around LOC105375065 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375065 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375065 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375065 Gene

Proteins for LOC105375065 Gene

Post-translational modifications for LOC105375065 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375065 Gene

Domains & Families for LOC105375065 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375065 Gene

Function for LOC105375065 Gene

Phenotypes From GWAS Catalog for LOC105375065 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375065 Gene

Localization for LOC105375065 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375065 Gene

Pathways & Interactions for LOC105375065 Gene

SuperPathways for LOC105375065 Gene

No Data Available

Interacting Proteins for LOC105375065 Gene

Gene Ontology (GO) - Biological Process for LOC105375065 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375065 Gene

Drugs & Compounds for LOC105375065 Gene

No Compound Related Data Available

Transcripts for LOC105375065 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375065 Gene

No ASD Table

Relevant External Links for LOC105375065 Gene

GeneLoc Exon Structure for
LOC105375065

No data available for mRNA/cDNA for LOC105375065 Gene

Expression for LOC105375065 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375065 Gene

Orthologs for LOC105375065 Gene

No data available for Orthologs and Evolution for LOC105375065 Gene

Paralogs for LOC105375065 Gene

No data available for Paralogs for LOC105375065 Gene

Variants for LOC105375065 Gene

Sequence variations from dbSNP and Humsavar for LOC105375065 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000048205 -- 43,422,045(+) G/T genic_downstream_transcript_variant, intron_variant
rs1000168755 -- 43,390,806(+) G/A/C upstream_transcript_variant
rs1000177992 -- 43,394,101(+) C/T intron_variant
rs1000179173 -- 43,407,335(+) CT/ genic_downstream_transcript_variant, intron_variant
rs1000222174 -- 43,410,894(+) G/T genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375065 Gene

Disorders for LOC105375065 Gene

No disorders were found for LOC105375065 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375065 Gene

Publications for LOC105375065 Gene

No publications were found for LOC105375065 Gene.

Products for LOC105375065 Gene

Sources for LOC105375065 Gene

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