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Aliases for LOC105375061 Gene

Subcategory (RNA class) for LOC105375061 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375061 Gene

  • Uncharacterized LOC105375061 3

External Ids for LOC105375061 Gene

Previous GeneCards Identifiers for LOC105375061 Gene

  • GC06U902988

Summaries for LOC105375061 Gene

GeneCards Summary for LOC105375061 Gene

LOC105375061 (Uncharacterized LOC105375061) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375061 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375061 Gene

Genomics for LOC105375061 Gene

GeneHancer (GH) Regulatory Elements for LOC105375061 Gene

Promoters and enhancers for LOC105375061 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J042232 Enhancer 0.5 dbSUPER 650.7 -1.9 -1864 0.8 CBFA2T3 ZFP91 MLLT1 ZBTB17 LOC105375061 GUCA1B PIR36094 TRERF1
GH06J042230 Enhancer 0.7 dbSUPER 0.7 -3.2 -3198 1.6 CTCF TEAD4 ZNF384 ZIC2 RAD21 CC2D1A ZFHX2 EGR1 VEZF1 ZNF143 GUCA1B MRPS10 LOC105375061 PIR36094 TRERF1
GH06J042250 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +17.5 17471 3.8 NFIB KLF17 RAD21 YY1 SCRT2 RCOR1 EGR2 RXRA ZNF398 NR2F2 GUCA1B ENSG00000214732 GUCA1A MRPS10 LOC105375061 GC06M042412 TRERF1
GH06J042236 Enhancer 0.6 FANTOM5 0.7 +2.5 2463 0.4 PKNOX1 BHLHE40 TRIM22 JUNB MEF2B BATF ATF2 RELA MITF EED GUCA1B GUCA1A ENSG00000214732 TRERF1 LOC105375061 GC06M042412
GH06J042260 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +26.5 26527 1.2 HDAC1 NFIB SIN3A ZNF48 RAD21 ZNF143 FOS EGR2 USF2 REST CUL7 RPL24P4 MED20 BICRAL MRPS10 LOC105375061 GC06M042412 TRERF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375061 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375061 Gene

Genomic Locations for LOC105375061 Gene
chr6:42,234,458-42,240,949
(GRCh38/hg38)
Size:
6,492 bases
Orientation:
Plus strand

Genomic View for LOC105375061 Gene

Genes around LOC105375061 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375061 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375061 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375061 Gene

Proteins for LOC105375061 Gene

Post-translational modifications for LOC105375061 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375061 Gene

Domains & Families for LOC105375061 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375061 Gene

Function for LOC105375061 Gene

Phenotypes From GWAS Catalog for LOC105375061 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375061 Gene

Localization for LOC105375061 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375061 Gene

Pathways & Interactions for LOC105375061 Gene

SuperPathways for LOC105375061 Gene

No Data Available

Interacting Proteins for LOC105375061 Gene

Gene Ontology (GO) - Biological Process for LOC105375061 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375061 Gene

Drugs & Compounds for LOC105375061 Gene

No Compound Related Data Available

Transcripts for LOC105375061 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375061 Gene

No ASD Table

Relevant External Links for LOC105375061 Gene

GeneLoc Exon Structure for
LOC105375061

No data available for mRNA/cDNA for LOC105375061 Gene

Expression for LOC105375061 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375061 Gene

Orthologs for LOC105375061 Gene

No data available for Orthologs and Evolution for LOC105375061 Gene

Paralogs for LOC105375061 Gene

No data available for Paralogs for LOC105375061 Gene

Variants for LOC105375061 Gene

Sequence variations from dbSNP and Humsavar for LOC105375061 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000832291 -- 42,237,616(+) C/T non_coding_transcript_variant
rs1001056838 -- 42,232,555(+) G/A upstream_transcript_variant
rs1001790323 -- 42,234,999(+) G/A non_coding_transcript_variant
rs1002005264 -- 42,237,949(+) A/C non_coding_transcript_variant
rs1002153285 -- 42,233,170(+) G/A/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375061 Gene

Disorders for LOC105375061 Gene

No disorders were found for LOC105375061 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375061 Gene

Publications for LOC105375061 Gene

No publications were found for LOC105375061 Gene.

Products for LOC105375061 Gene

Sources for LOC105375061 Gene

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