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Aliases for LOC105375059 Gene

Subcategory (RNA class) for LOC105375059 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375059 Gene

  • Uncharacterized LOC105375059 3

External Ids for LOC105375059 Gene

Previous GeneCards Identifiers for LOC105375059 Gene

  • GC06U902930

Summaries for LOC105375059 Gene

GeneCards Summary for LOC105375059 Gene

LOC105375059 (Uncharacterized LOC105375059) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375059 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375059 Gene

Genomics for LOC105375059 Gene

GeneHancer (GH) Regulatory Elements for LOC105375059 Gene

Promoters and enhancers for LOC105375059 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J042012 Enhancer 0.5 ENCODE dbSUPER 650.7 -0.6 -639 1 ZNF316 LOC105375059 ENSG00000124593 USP49 MED20 ENSG00000207371 BYSL ENSG00000206977 LOC105375060 CCND3
GH06J042014 Enhancer 0.3 dbSUPER 650.7 +1.1 1092 1.2 ZBTB33 LOC105375059 ENSG00000124593 RNU6-761P GC06M042019 CCND3
GH06J042016 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.7 +3.2 3203 2 PKNOX1 SMAD1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 ZFP91 FOS RNU6-761P GC06M042019 ENSG00000124593 LOC105375059 CCND3
GH06J042006 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 -4.3 -4309 5.3 PKNOX1 ATF1 ARNT TCF12 ZNF766 ARID2 ZFP91 ATF7 RUNX3 SP3 ENSG00000124593 UBR2 BICRAL TAF8 CCND3 MED20 ENSG00000207371 BYSL USP49 ENSG00000206977
GH06J041996 Enhancer 0.7 FANTOM5 ENCODE dbSUPER 0.4 -16.5 -16495 1.9 LOC105375060 GUCA1A RNU6-761P ENSG00000207371 MED20 BYSL USP49 ENSG00000206977 LOC105375059 CCND3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375059 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375059 Gene

Genomic Locations for LOC105375059 Gene
chr6:42,013,860-42,017,799
(GRCh38/hg38)
Size:
3,940 bases
Orientation:
Plus strand

Genomic View for LOC105375059 Gene

Genes around LOC105375059 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375059 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375059 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375059 Gene

Proteins for LOC105375059 Gene

Post-translational modifications for LOC105375059 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375059 Gene

Domains & Families for LOC105375059 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375059 Gene

Function for LOC105375059 Gene

Phenotypes From GWAS Catalog for LOC105375059 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375059 Gene

Localization for LOC105375059 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375059 Gene

Pathways & Interactions for LOC105375059 Gene

SuperPathways for LOC105375059 Gene

No Data Available

Interacting Proteins for LOC105375059 Gene

Gene Ontology (GO) - Biological Process for LOC105375059 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375059 Gene

Drugs & Compounds for LOC105375059 Gene

No Compound Related Data Available

Transcripts for LOC105375059 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375059 Gene

No ASD Table

Relevant External Links for LOC105375059 Gene

GeneLoc Exon Structure for
LOC105375059

No data available for mRNA/cDNA for LOC105375059 Gene

Expression for LOC105375059 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375059 Gene

Orthologs for LOC105375059 Gene

No data available for Orthologs and Evolution for LOC105375059 Gene

Paralogs for LOC105375059 Gene

No data available for Paralogs for LOC105375059 Gene

Variants for LOC105375059 Gene

Sequence variations from dbSNP and Humsavar for LOC105375059 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000052894 -- 42,013,706(+) C/A intron_variant
rs1000370707 -- 42,019,306(+) G/A genic_downstream_transcript_variant, intron_variant
rs1000888547 -- 42,019,715(+) G/T genic_downstream_transcript_variant, intron_variant
rs1001064717 -- 42,019,346(+) G/A genic_downstream_transcript_variant, intron_variant
rs1001266003 -- 42,013,944(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375059 Gene

Disorders for LOC105375059 Gene

No disorders were found for LOC105375059 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375059 Gene

Publications for LOC105375059 Gene

No publications were found for LOC105375059 Gene.

Products for LOC105375059 Gene

Sources for LOC105375059 Gene

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