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Aliases for LOC105375038 Gene

Subcategory (RNA class) for LOC105375038 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375038 Gene

  • Uncharacterized LOC105375038 3

External Ids for LOC105375038 Gene

Previous GeneCards Identifiers for LOC105375038 Gene

  • GC06U902979
  • GC06P036968
  • GC06P037816
  • GC06P038445
  • GC06P039044
  • GC06P039632
  • GC06P040195

Summaries for LOC105375038 Gene

GeneCards Summary for LOC105375038 Gene

LOC105375038 (Uncharacterized LOC105375038) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375038 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375038 Gene

Genomics for LOC105375038 Gene

GeneHancer (GH) Regulatory Elements for LOC105375038 Gene

Promoters and enhancers for LOC105375038 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I036639 Enhancer 0.3 Ensembl 550.8 +0.6 589 0.2 POLR2A GC06M038337 LOC105375038 RNU1-88P ENSG00000251864
GH06I036641 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.8 +4.1 4136 4.1 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 ZNF121 ATF7 FOS RXRA CMTR1 BRPF3 RNF8 ETV7 KCTD20 SLC26A8 GC06M038337 LOC105375038 RNU1-88P ENSG00000251864
GH06I036633 Enhancer 1 Ensembl ENCODE 0.8 -4.9 -4934 1.2 ELF3 SOX13 FOXA2 SAP130 ZFP64 FEZF1 ZNF2 RAD21 RARA ZNF7 ETV7 KCTD20 STK38 LOC105375038 MIR3925
GH06I036623 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -14.6 -14576 2.9 HDGF PKNOX1 ATF1 SMAD1 ARID4B SIN3A ZNF2 IRF4 SLC30A9 ARID2 CMTR1 BRPF3 SRSF3 LAP3P2 ENSG00000251864 CDKN1A RAB44 KCTD20 PI16 C6orf89
GH06I036627 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -10.5 -10458 2.6 HDGF SMARCA5 NR2F1 EBF1 RELA ZFHX2 IKZF1 NBN MLLT1 ZBTB33 KCTD20 ETV7 MIR3925 LOC105375038
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375038 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375038 Gene

Genomic Locations for LOC105375038 Gene
chr6:36,639,111-36,642,010
(GRCh38/hg38)
Size:
2,900 bases
Orientation:
Plus strand

Genomic View for LOC105375038 Gene

Genes around LOC105375038 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375038 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375038 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375038 Gene

Proteins for LOC105375038 Gene

Post-translational modifications for LOC105375038 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375038 Gene

Domains & Families for LOC105375038 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375038 Gene

Function for LOC105375038 Gene

Phenotypes From GWAS Catalog for LOC105375038 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375038 Gene

Localization for LOC105375038 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375038 Gene

Pathways & Interactions for LOC105375038 Gene

SuperPathways for LOC105375038 Gene

No Data Available

Interacting Proteins for LOC105375038 Gene

Gene Ontology (GO) - Biological Process for LOC105375038 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375038 Gene

Drugs & Compounds for LOC105375038 Gene

No Compound Related Data Available

Transcripts for LOC105375038 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375038 Gene

No ASD Table

Relevant External Links for LOC105375038 Gene

GeneLoc Exon Structure for
LOC105375038

No data available for mRNA/cDNA for LOC105375038 Gene

Expression for LOC105375038 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375038 Gene

Orthologs for LOC105375038 Gene

No data available for Orthologs and Evolution for LOC105375038 Gene

Paralogs for LOC105375038 Gene

No data available for Paralogs for LOC105375038 Gene

Variants for LOC105375038 Gene

Sequence variations from dbSNP and Humsavar for LOC105375038 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000834874 -- 36,641,314(+) T/C intron_variant
rs1000989778 -- 36,641,609(+) C/T non_coding_transcript_variant
rs1001051586 -- 36,639,037(+) C/T non_coding_transcript_variant
rs1001773114 -- 36,640,188(+) C/T intron_variant
rs1002211165 -- 36,638,578(+) C/G/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375038 Gene

Disorders for LOC105375038 Gene

No disorders were found for LOC105375038 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375038 Gene

Publications for LOC105375038 Gene

No publications were found for LOC105375038 Gene.

Products for LOC105375038 Gene

Sources for LOC105375038 Gene

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