Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105375037 Gene

Subcategory (RNA class) for LOC105375037 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375037 Gene

  • Uncharacterized LOC105375037 3
  • Z84484.1 5

External Ids for LOC105375037 Gene

Previous GeneCards Identifiers for LOC105375037 Gene

  • GC06U903236
  • GC06P036960
  • GC06P037815
  • GC06P038444
  • GC06P039043
  • GC06P039631
  • GC06P040194

Summaries for LOC105375037 Gene

GeneCards Summary for LOC105375037 Gene

LOC105375037 (Uncharacterized LOC105375037) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375037 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375037 Gene

Genomics for LOC105375037 Gene

GeneHancer (GH) Regulatory Elements for LOC105375037 Gene

Promoters and enhancers for LOC105375037 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I036386 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 550.8 +1.0 983 2.5 CTCF MEIS2 IRF2 SUZ12 NFIB EBF1 ETV6 RUNX3 EZH2 STAT1 ETV7 LOC105375037 KCTD20
GH06I036439 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.6 +56.5 56452 6.9 MLX FEZF1 DMAP1 YY1 E2F8 ZNF143 SP3 NFYC MEF2D SSRP1 KCTD20 PXT1 ETV7 SRSF3 LOC105375037 RNF8 CDKN1A RPL10A PI16 MAPK14
GH06I036422 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 12.1 +37.1 37135 2 CLOCK MLX ARID4B SIN3A ZNF2 YY1 POLR2B ZNF766 E2F8 ZNF207 ETV7 STK38 KCTD20 MAPK14 SRSF3 ENSG00000237719 LOC105375037 C6orf222 PI16 MAPK13
GH06I036357 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -27.9 -27867 1.4 HDGF PKNOX1 BMI1 BATF KLF5 IRF4 ATF7 IKZF2 RUNX3 CREM C6orf222 ETV7 LOC105375037 FGD2 MAPK13 KCTD20 PXT1 PNPLA1 CPNE5 PIR35042
GH06I036360 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.4 -25.7 -25744 1.1 ELF3 RB1 ARID4B SIN3A KLF5 ZNF48 RAD21 SLC30A9 SCRT2 ZNF143 C6orf222 ETV7 LOC105375037 KCTD20 PXT1 PNPLA1 PIR35042
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375037 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375037 Gene

Genomic Locations for LOC105375037 Gene
chr6:36,386,395-36,393,462
(GRCh38/hg38)
Size:
7,068 bases
Orientation:
Plus strand
chr6:36,354,608-36,359,771
(GRCh37/hg19)

Genomic View for LOC105375037 Gene

Genes around LOC105375037 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375037 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375037 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375037 Gene

Proteins for LOC105375037 Gene

Post-translational modifications for LOC105375037 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375037 Gene

Domains & Families for LOC105375037 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375037 Gene

Function for LOC105375037 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375037 Gene

Localization for LOC105375037 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375037 Gene

Pathways & Interactions for LOC105375037 Gene

SuperPathways for LOC105375037 Gene

No Data Available

Interacting Proteins for LOC105375037 Gene

Gene Ontology (GO) - Biological Process for LOC105375037 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375037 Gene

Drugs & Compounds for LOC105375037 Gene

No Compound Related Data Available

Transcripts for LOC105375037 Gene

mRNA/cDNA for LOC105375037 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375037 Gene

No ASD Table

Relevant External Links for LOC105375037 Gene

GeneLoc Exon Structure for
LOC105375037

Expression for LOC105375037 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375037 Gene

Orthologs for LOC105375037 Gene

Evolution for LOC105375037 Gene

ENSEMBL:
Gene Tree for LOC105375037 (if available)
TreeFam:
Gene Tree for LOC105375037 (if available)

No data available for Orthologs for LOC105375037 Gene

Paralogs for LOC105375037 Gene

No data available for Paralogs for LOC105375037 Gene

Variants for LOC105375037 Gene

Sequence variations from dbSNP and Humsavar for LOC105375037 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000977140 -- 36,386,959(+) TAACT/TAACTAACT intron_variant
rs1001029520 -- 36,387,194(+) T/C intron_variant
rs1001101844 -- 36,389,502(+) T/C intron_variant
rs1001581937 -- 36,386,073(+) A/G upstream_transcript_variant
rs1002315393 -- 36,387,714(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375037 Gene

Disorders for LOC105375037 Gene

No disorders were found for LOC105375037 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375037 Gene

Publications for LOC105375037 Gene

No publications were found for LOC105375037 Gene.

Products for LOC105375037 Gene

Sources for LOC105375037 Gene

Content
Loading form....