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Aliases for LOC105375036 Gene

Subcategory (RNA class) for LOC105375036 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375036 Gene

  • Uncharacterized LOC105375036 3

External Ids for LOC105375036 Gene

Previous GeneCards Identifiers for LOC105375036 Gene

  • GC06U903183
  • GC06M036412
  • GC06M036413
  • GC06M036684
  • GC06M037039
  • GC06M037392
  • GC06M037749

Summaries for LOC105375036 Gene

GeneCards Summary for LOC105375036 Gene

LOC105375036 (Uncharacterized LOC105375036) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375036 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375036 Gene

Genomics for LOC105375036 Gene

GeneHancer (GH) Regulatory Elements for LOC105375036 Gene

Promoters and enhancers for LOC105375036 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I036246 Enhancer 1.1 FANTOM5 Ensembl ENCODE 550.8 +0.3 278 3.6 CTCF JUN HLF CEBPB CEBPG NR2F2 FOXA1 ZNF217 ATF4 CEBPA LOC105375036 PXT1 LOC102723648 BRPF3 C6orf222 SLC26A8 MAPK13 MAPK14 SRPK1 KCTD20
GH06I036244 Enhancer 0.9 Ensembl ENCODE 0.8 +3.0 2972 1.7 MEIS2 CTCF PKNOX1 ASH1L RAD21 ZKSCAN1 ZNF316 POLR2A ZNF143 FOS SLC26A8 LOC105375036 PNPLA1
GH06I036333 Promoter/Enhancer 1.8 EPDnew FANTOM5 ENCODE dbSUPER 0.2 -87.2 -87225 4.2 ATF1 PKNOX1 CLOCK FOXA2 SIN3A FEZF1 SCRT2 ATF7 CREM IKZF2 C6orf222 LOC105375036
GH06I036290 Enhancer 1.1 Ensembl ENCODE 0.3 -43.0 -43012 3 PKNOX1 ZNF766 FOS ATF7 ZNF623 ATF4 SMARCA4 NBN NR2C1 KDM1A C6orf222 PNPLA1 CLPS BRPF3 MAPK13 LOC105375036
GH06I036241 Enhancer 0.7 Ensembl 0.4 +6.4 6439 1 ATF1 TEAD4 ZNF366 ETV6 IKZF2 RUNX3 CREM RNF2 L3MBTL2 MTA2 LOC102723648 BRPF3 MAPK13 PNPLA1 LOC105375036
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375036 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375036 Gene

Genomic Locations for LOC105375036 Gene
chr6:36,241,391-36,248,340
(GRCh38/hg38)
Size:
6,950 bases
Orientation:
Minus strand

Genomic View for LOC105375036 Gene

Genes around LOC105375036 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375036 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375036 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375036 Gene

Proteins for LOC105375036 Gene

Post-translational modifications for LOC105375036 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375036 Gene

Domains & Families for LOC105375036 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375036 Gene

Function for LOC105375036 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375036 Gene

Localization for LOC105375036 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375036 Gene

Pathways & Interactions for LOC105375036 Gene

SuperPathways for LOC105375036 Gene

No Data Available

Interacting Proteins for LOC105375036 Gene

Gene Ontology (GO) - Biological Process for LOC105375036 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375036 Gene

Drugs & Compounds for LOC105375036 Gene

No Compound Related Data Available

Transcripts for LOC105375036 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375036 Gene

No ASD Table

Relevant External Links for LOC105375036 Gene

GeneLoc Exon Structure for
LOC105375036

No data available for mRNA/cDNA for LOC105375036 Gene

Expression for LOC105375036 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375036 Gene

Orthologs for LOC105375036 Gene

No data available for Orthologs and Evolution for LOC105375036 Gene

Paralogs for LOC105375036 Gene

No data available for Paralogs for LOC105375036 Gene

Variants for LOC105375036 Gene

Sequence variations from dbSNP and Humsavar for LOC105375036 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000021864 -- 36,248,867(-) T/A/C upstream_transcript_variant
rs1000261594 -- 36,243,566(-) T/C intron_variant
rs1001279453 -- 36,246,058(-) T/A intron_variant
rs1001323936 -- 36,243,874(-) G/A intron_variant, non_coding_transcript_variant
rs1001835964 -- 36,249,856(-) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375036 Gene

Disorders for LOC105375036 Gene

No disorders were found for LOC105375036 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375036 Gene

Publications for LOC105375036 Gene

No publications were found for LOC105375036 Gene.

Products for LOC105375036 Gene

Sources for LOC105375036 Gene

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