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Aliases for LOC105375029 Gene

Subcategory (RNA class) for LOC105375029 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375029 Gene

  • Uncharacterized LOC105375029 3

External Ids for LOC105375029 Gene

Previous GeneCards Identifiers for LOC105375029 Gene

  • GC06U902815
  • GC06M035580
  • GC06M036310
  • GC06M036681
  • GC06M037035
  • GC06M037387
  • GC06M037746

Summaries for LOC105375029 Gene

GeneCards Summary for LOC105375029 Gene

LOC105375029 (Uncharacterized LOC105375029) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375029 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375029 Gene

Genomics for LOC105375029 Gene

GeneHancer (GH) Regulatory Elements for LOC105375029 Gene

Promoters and enhancers for LOC105375029 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I034720 Enhancer 0.8 Ensembl 550.8 -0.2 -159 0.2 HDAC1 ATF1 CAVIN1 HDAC8 ZNF592 MEF2D MTA1 GMEB1 NR2C1 ZNF24 LOC105375029 TAF11 C6orf106 ENSG00000220643 LEMD2 ZNF76 RPS10P13 GC06P042412
GH06I034718 Enhancer 0.7 Ensembl ENCODE 550.8 +0.7 727 1.2 JUND GATA3 ATF1 HDAC2 MNT ZSCAN29 PRDM10 LOC105375029 C6orf106 ENSG00000220643 ENSG00000186328 GC06P042412
GH06I034723 Enhancer 0.9 Ensembl ENCODE 0.8 -3.5 -3463 0.6 ZNF146 ESRRA FOXA2 SAP130 THRB RARA ZNF316 NR2F6 NFE2 MAFK SNRPC C6orf106 ENSG00000220643 LOC105375029 RPS10P13 GC06P042412
GH06I034722 Enhancer 0.7 ENCODE 0.8 -2.8 -2793 0.6 ESRRA FOXA2 SAP130 ZNF384 THRB RARA GATA3 GATAD2A SOX5 SMARCE1 UHRF1BP1 SNRPC C6orf106 ENSG00000220643 LOC105375029 RPS10P13 GC06P042412
GH06I034717 Enhancer 0.5 ENCODE 0.8 +2.4 2427 1.2 JUN CEBPA CEBPB ZNF384 CEBPG KDM1A C6orf106 ENSG00000220643 LOC105375029 ENSG00000186328 GC06P042412
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375029 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375029 Gene

Genomic Locations for LOC105375029 Gene
chr6:34,713,143-34,720,142
(GRCh38/hg38)
Size:
7,000 bases
Orientation:
Minus strand
chr6:33,851,955-33,851,984
(GRCh37/hg19)

Genomic View for LOC105375029 Gene

Genes around LOC105375029 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375029 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375029 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375029 Gene

Proteins for LOC105375029 Gene

Post-translational modifications for LOC105375029 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375029 Gene

Domains & Families for LOC105375029 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375029 Gene

Function for LOC105375029 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375029 Gene

Localization for LOC105375029 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375029 Gene

Pathways & Interactions for LOC105375029 Gene

SuperPathways for LOC105375029 Gene

No Data Available

Interacting Proteins for LOC105375029 Gene

Gene Ontology (GO) - Biological Process for LOC105375029 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375029 Gene

Drugs & Compounds for LOC105375029 Gene

No Compound Related Data Available

Transcripts for LOC105375029 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375029 Gene

No ASD Table

Relevant External Links for LOC105375029 Gene

GeneLoc Exon Structure for
LOC105375029

No data available for mRNA/cDNA for LOC105375029 Gene

Expression for LOC105375029 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375029 Gene

Orthologs for LOC105375029 Gene

No data available for Orthologs and Evolution for LOC105375029 Gene

Paralogs for LOC105375029 Gene

No data available for Paralogs for LOC105375029 Gene

Variants for LOC105375029 Gene

Sequence variations from dbSNP and Humsavar for LOC105375029 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000487851 -- 34,713,043(-) T/A downstream_transcript_variant
rs1000855078 -- 34,719,578(-) A/C intron_variant
rs1001405190 -- 34,719,147(-) T/G non_coding_transcript_variant
rs1001715326 -- 34,716,710(-) C/A intron_variant
rs1002585887 -- 34,718,455(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375029 Gene

Disorders for LOC105375029 Gene

No disorders were found for LOC105375029 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375029 Gene

Publications for LOC105375029 Gene

No publications were found for LOC105375029 Gene.

Products for LOC105375029 Gene

Sources for LOC105375029 Gene

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