Aliases for LOC105375027 Gene

Data sources for LOC105375027 Gene:

RNA type for LOC105375027 Gene

ncRNA

Aliases for LOC105375027 Gene

External Ids for LOC105375027 Gene

Previous GeneCards Identifiers for LOC105375027 Gene

  • GC06U903023

Summaries for LOC105375027 Gene

GeneCards Summary for LOC105375027 Gene

LOC105375027 (Uncharacterized LOC105375027) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375027 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105375027 Gene

Genomics for LOC105375027 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105375027 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J033857 Enhancer 0.5 ENCODE 250.7 +0.6 637 0.1 EBF1 BHLHE40 MYC MAX POLR2A RUNX3 LOC105375027 lnc-ITPR3-9 GRM4 MLN LEMD2 IP6K3 piR-46103
GH06J033856 Enhancer 0.4 FANTOM5 250.7 +0.0 32 0.1 TEAD3 ZNF205 TFAP4 RAD21 LOC105375027 lnc-ITPR3-9 GRM4 MLN LEMD2 IP6K3 piR-46103
GH06J033863 Enhancer 0.6 Ensembl 0.4 +7.8 7799 0.8 MCM3 TRIM25 ZBTB5 MCM5 HDAC2 EGR1 HDGF LARP7 MCM2 TARDBP DAXX LEMD2 ITPR3 RPS10 KIFC1 BRD2 WDR46 SMIM29 B3GALT4 RPS18
GH06J033861 Enhancer 0.6 ENCODE 0.4 +5.1 5077 0.2 MAFF IRF4 ZNF316 NFE2 MAFK BATF MAFG ATF2 JUNB BACH1 piR-46103 MLN MIR1275 LOC105375027 lnc-ITPR3-9 piR-49539 GRM4
GH06J033874 Enhancer 0.5 Ensembl 0.4 +19.2 19198 0.8 MEIS2 KLF1 ATF3 ZNF311 PRDM10 PKNOX1 ATF7 piR-31669 piR-31833 piR-31853 piR-31859 piR-31957 piR-38309 piR-38312 piR-41894 piR-32488 piR-32522
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105375027 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105375027 Gene

Latest Assembly
chr6:33,856,202-33,878,012
(GRCh38/hg38)
Size:
21,811 bases
Orientation:
Plus strand

Genomic View for LOC105375027 Gene

Genes around LOC105375027 on UCSC Golden Path with GeneCards custom track
LOC105375027 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105375027 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375027 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375027 Gene

Proteins for LOC105375027 Gene

Post-translational modifications for LOC105375027 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375027 Gene

Domains & Families for LOC105375027 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105375027 Gene

Function for LOC105375027 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375027 Gene

Localization for LOC105375027 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375027 Gene

Pathways & Interactions for LOC105375027 Gene

PathCards logo

SuperPathways for LOC105375027 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105375027 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105375027 Gene

Drugs & Compounds for LOC105375027 Gene

No Compound Related Data Available

Transcripts for LOC105375027 Gene

LOC105375027 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375027 Gene

No ASD Table

Relevant External Links for LOC105375027 Gene

GeneLoc Exon Structure for
LOC105375027

No data available for mRNA/cDNA for LOC105375027 Gene

Expression for LOC105375027 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375027 Gene

Orthologs for LOC105375027 Gene

No data available for Orthologs and Evolution for LOC105375027 Gene

Paralogs for LOC105375027 Gene

No data available for Paralogs for LOC105375027 Gene

Variants for LOC105375027 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105375027 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375027 Gene

Disorders for LOC105375027 Gene

No disorders were found for LOC105375027 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375027 Gene

Publications for LOC105375027 Gene

No publications were found for LOC105375027 Gene.

No data available for Mastermind for LOC105375027 Gene

Products for LOC105375027 Gene

Sources for LOC105375027 Gene