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Aliases for LOC105375027 Gene

Subcategory (RNA class) for LOC105375027 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375027 Gene

  • Uncharacterized LOC105375027 3

External Ids for LOC105375027 Gene

Previous GeneCards Identifiers for LOC105375027 Gene

  • GC06U903023

Summaries for LOC105375027 Gene

GeneCards Summary for LOC105375027 Gene

LOC105375027 (Uncharacterized LOC105375027) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375027 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375027 Gene

Genomics for LOC105375027 Gene

GeneHancer (GH) Regulatory Elements for LOC105375027 Gene

Promoters and enhancers for LOC105375027 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I033856 Enhancer 0.5 FANTOM5 550.8 +0.0 32 0.1 TFAP4 HNF4A RAD21 TEAD3 PIRC26 LOC105375027 GRM4 MLN LEMD2 IP6K3 GC06M038550 PIR39102
GH06I033857 Enhancer 0.5 ENCODE 550.8 +0.6 637 0.1 POLR2A MAX EBF1 MYC RUNX3 PIRC26 LOC105375027 GRM4 MLN LEMD2 IP6K3 GC06M038550 PIR39102
GH06I033861 Enhancer 0.6 ENCODE 0.4 +5.1 5077 0.2 ZNF449 JUNB MAFG BACH1 CBFA2T3 ZEB2 BATF ATF2 IRF4 MAFF GC06M038550 PIR39102 MLN MIR1275 PIRC25 PIRC26 LOC105375027
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375027 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375027 Gene

Genomic Locations for LOC105375027 Gene
chr6:33,856,202-33,877,132
(GRCh38/hg38)
Size:
20,931 bases
Orientation:
Plus strand

Genomic View for LOC105375027 Gene

Genes around LOC105375027 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375027 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375027 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375027 Gene

Proteins for LOC105375027 Gene

Post-translational modifications for LOC105375027 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375027 Gene

Domains & Families for LOC105375027 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375027 Gene

Function for LOC105375027 Gene

Phenotypes From GWAS Catalog for LOC105375027 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375027 Gene

Localization for LOC105375027 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375027 Gene

Pathways & Interactions for LOC105375027 Gene

SuperPathways for LOC105375027 Gene

No Data Available

Interacting Proteins for LOC105375027 Gene

Gene Ontology (GO) - Biological Process for LOC105375027 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375027 Gene

Drugs & Compounds for LOC105375027 Gene

No Compound Related Data Available

Transcripts for LOC105375027 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375027 Gene

No ASD Table

Relevant External Links for LOC105375027 Gene

GeneLoc Exon Structure for
LOC105375027

No data available for mRNA/cDNA for LOC105375027 Gene

Expression for LOC105375027 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375027 Gene

Orthologs for LOC105375027 Gene

No data available for Orthologs and Evolution for LOC105375027 Gene

Paralogs for LOC105375027 Gene

No data available for Paralogs for LOC105375027 Gene

Variants for LOC105375027 Gene

Sequence variations from dbSNP and Humsavar for LOC105375027 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000175145 -- 33,860,862(+) C/T intron_variant
rs1000245308 -- 33,858,685(+) G/A intron_variant
rs1000441188 -- 33,866,620(+) A/G intron_variant
rs1000588148 -- 33,872,328(+) G/C intron_variant, non_coding_transcript_variant
rs1000710955 -- 33,855,055(+) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375027 Gene

Disorders for LOC105375027 Gene

No disorders were found for LOC105375027 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375027 Gene

Publications for LOC105375027 Gene

No publications were found for LOC105375027 Gene.

Products for LOC105375027 Gene

Sources for LOC105375027 Gene

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