Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105375023 Gene

Subcategory (RNA class) for LOC105375023 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375023 Gene

  • Uncharacterized LOC105375023 3

External Ids for LOC105375023 Gene

Previous GeneCards Identifiers for LOC105375023 Gene

  • GC06U903252

Summaries for LOC105375023 Gene

GeneCards Summary for LOC105375023 Gene

LOC105375023 (Uncharacterized LOC105375023) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375023 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375023 Gene

Genomics for LOC105375023 Gene

GeneHancer (GH) Regulatory Elements for LOC105375023 Gene

Promoters and enhancers for LOC105375023 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I033631 Enhancer 1.3 Ensembl ENCODE dbSUPER 550.8 -0.7 -690 3.5 HDGF PKNOX1 ATF1 FOXA2 ARID4B SIN3A DMAP1 ZNF48 GLIS2 ZNF143 LOC101929188 PIR39393 LOC105375023 PIR57358 ITPR3 IP6K3 BAK1
GH06I033637 Enhancer 0.7 ENCODE dbSUPER 0.8 +4.6 4615 2.8 ZNF366 YBX1 ZNF600 RAD21 EGR2 ITPR3 IP6K3 CUTA LOC105375023 MIR3934
GH06I033672 Enhancer 1 Ensembl ENCODE 0.3 +39.6 39617 2 HDGF ARID4B KLF17 SIN3A RAD21 RFX5 GLIS2 RCOR1 FOS SMARCC1 ITPR3 IP6K3 BAK1 MIR3934 LOC105375023
GH06I033668 Enhancer 0.8 ENCODE dbSUPER 0.3 +35.2 35188 1.6 MXI1 KLF1 PKNOX1 L3MBTL2 BHLHE40 MAX USF2 KLF4 CTBP1 SMC3 IP6K3 ITPR3 MIR3934 LOC105375023
GH06I033691 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.2 +61.1 61076 7.2 PKNOX1 KLF17 MZF1 FEZF1 GLIS2 SCRT2 RUNX3 NR2F2 ZFP69B MAFF UQCC2 IP6K3 BAK1 LEMD2 HLA-DPA1 RPS18 ITPR3 MIR3934 LOC105375023
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375023 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375023 Gene

Genomic Locations for LOC105375023 Gene
chr6:33,633,876-33,635,421
(GRCh38/hg38)
Size:
1,546 bases
Orientation:
Plus strand

Genomic View for LOC105375023 Gene

Genes around LOC105375023 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375023 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375023 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375023 Gene

Proteins for LOC105375023 Gene

Post-translational modifications for LOC105375023 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375023 Gene

Domains & Families for LOC105375023 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375023 Gene

Function for LOC105375023 Gene

Phenotypes From GWAS Catalog for LOC105375023 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375023 Gene

Localization for LOC105375023 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375023 Gene

Pathways & Interactions for LOC105375023 Gene

SuperPathways for LOC105375023 Gene

No Data Available

Interacting Proteins for LOC105375023 Gene

Gene Ontology (GO) - Biological Process for LOC105375023 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375023 Gene

Drugs & Compounds for LOC105375023 Gene

No Compound Related Data Available

Transcripts for LOC105375023 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375023 Gene

No ASD Table

Relevant External Links for LOC105375023 Gene

GeneLoc Exon Structure for
LOC105375023

No data available for mRNA/cDNA for LOC105375023 Gene

Expression for LOC105375023 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375023 Gene

Orthologs for LOC105375023 Gene

No data available for Orthologs and Evolution for LOC105375023 Gene

Paralogs for LOC105375023 Gene

No data available for Paralogs for LOC105375023 Gene

Variants for LOC105375023 Gene

Sequence variations from dbSNP and Humsavar for LOC105375023 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1001608197 -- 33,633,714(+) G/A upstream_transcript_variant
rs1002800501 -- 33,634,096(+) C/A/T intron_variant
rs1004853500 -- 33,635,020(+) C/T intron_variant
rs1005442669 -- 33,633,676(+) G/A upstream_transcript_variant
rs1005576970 -- 33,635,480(+) G/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375023 Gene

Disorders for LOC105375023 Gene

No disorders were found for LOC105375023 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375023 Gene

Publications for LOC105375023 Gene

No publications were found for LOC105375023 Gene.

Products for LOC105375023 Gene

Sources for LOC105375023 Gene

Content
Loading form....