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Aliases for LOC105375022 Gene

Subcategory (RNA class) for LOC105375022 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375022 Gene

  • Uncharacterized LOC105375022 3
  • XXbac-BPG157A10.21 3
  • AL645940.1 5

External Ids for LOC105375022 Gene

Previous GeneCards Identifiers for LOC105375022 Gene

  • GC06U902883

Summaries for LOC105375022 Gene

GeneCards Summary for LOC105375022 Gene

LOC105375022 (Uncharacterized LOC105375022) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375022 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375022 Gene

Genomics for LOC105375022 Gene

GeneHancer (GH) Regulatory Elements for LOC105375022 Gene

Promoters and enhancers for LOC105375022 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J033430 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 12.3 -185.3 -185334 4.5 HDGF ATF1 FOXA2 ARID4B SIN3A ZNF48 ETS1 GLIS2 ELK1 ZNF143 RING1 HCG25 ZBTB9 DAXX PHF1 SYNGAP1 LOC105375022 LEMD2 VPS52 SMIM29
GH06J034068 Enhancer 0.9 dbSUPER 12.2 -823.3 -823342 4.3 ZNF473 NFIB ZSCAN4 INSM2 YBX1 PLRG1 ZNF416 ZNF207 ZNF548 MCM5 RING1 TAF11 HCG25 LEMD2 VPS52 RXRB DAXX PHF1 ITPR3 KIFC1
GH06J032415 Enhancer 1 Ensembl ENCODE 10.1 +831.4 831370 0.6 RB1 BMI1 ZNF2 KLF5 ZSCAN9 RAD21 RFX5 ZNF335 ZNF614 ZNF366 HLA-DRB1 C4A TAP1 PSMB9 LOC105375022 MICB BTNL2 HLA-DRA
GH06J034072 Enhancer 0.8 dbSUPER 12.2 -827.5 -827525 4 ZNF473 ZNF493 YBX1 PLRG1 ZNF23 ZNF416 ZNF207 EGR2 ZNF202 GATAD2B TAF11 LEMD2 HCG25 RING1 VPS52 DAXX RXRB WDR46 RGL2 RPS10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375022 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375022 Gene

Genomic Locations for LOC105375022 Gene
chr6:33,246,075-33,247,086
(GRCh38/hg38)
Size:
1,012 bases
Orientation:
Minus strand
chr6:33,213,852-33,214,633
(GRCh37/hg19)
Size:
782 bases
Orientation:
Minus strand

Genomic View for LOC105375022 Gene

Genes around LOC105375022 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375022 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375022 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for LOC105375022 Gene

Post-translational modifications for LOC105375022 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375022 Gene

Domains & Families for LOC105375022 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375022 Gene

Function for LOC105375022 Gene

Phenotypes From GWAS Catalog for LOC105375022 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375022 Gene

Localization for LOC105375022 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375022 Gene

Pathways & Interactions for LOC105375022 Gene

SuperPathways for LOC105375022 Gene

No Data Available

Interacting Proteins for LOC105375022 Gene

Gene Ontology (GO) - Biological Process for LOC105375022 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375022 Gene

Drugs & Compounds for LOC105375022 Gene

No Compound Related Data Available

Transcripts for LOC105375022 Gene

mRNA/cDNA for LOC105375022 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375022 Gene

No ASD Table

Relevant External Links for LOC105375022 Gene

GeneLoc Exon Structure for
LOC105375022

Expression for LOC105375022 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375022 Gene

Orthologs for LOC105375022 Gene

Evolution for LOC105375022 Gene

ENSEMBL:
Gene Tree for LOC105375022 (if available)
TreeFam:
Gene Tree for LOC105375022 (if available)

No data available for Orthologs for LOC105375022 Gene

Paralogs for LOC105375022 Gene

No data available for Paralogs for LOC105375022 Gene

Variants for LOC105375022 Gene

Sequence variations from dbSNP and Humsavar for LOC105375022 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000097763 -- 33,246,638(-) G/C intron_variant
rs1003675768 -- 33,248,542(-) C/T upstream_transcript_variant
rs1005227694 -- 33,247,805(-) T/C upstream_transcript_variant
rs1005232562 -- 33,249,086(-) A/G upstream_transcript_variant
rs1005286350 -- 33,248,737(-) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375022 Gene

Disorders for LOC105375022 Gene

No disorders were found for LOC105375022 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375022 Gene

Publications for LOC105375022 Gene

No publications were found for LOC105375022 Gene.

Products for LOC105375022 Gene

Sources for LOC105375022 Gene

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